Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 AC046185.3-201ENST00000623228 1824 ntBASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 PC-208ENST00000529047 1607 ntTSL 3 BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 AC093525.9-201ENST00000624961 1746 ntBASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 AL023973.1-201ENST00000624619 620 ntBASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 TBC1D3P5-201ENST00000579401 1545 ntBASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 AC005915.1-201ENST00000624912 2018 ntBASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 AMT-250ENST00000637682 1823 ntTSL 5 BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 UBALD1-205ENST00000590891 2641 ntBASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC12.04□□□□□ -0.48
CDC42SE2Q9NRR3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CDC42SE2Q9NRR3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CDC42SE2Q9NRR3 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CDC42SE2Q9NRR3 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CDC42SE2Q9NRR3 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CDC42SE2Q9NRR3 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CDC42SE2Q9NRR3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CDC42SE2Q9NRR3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC12.03□□□□□ -0.48
CDC42SE2Q9NRR3 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CDC42SE2Q9NRR3 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CDC42SE2Q9NRR3 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC12.03□□□□□ -0.48
CDC42SE2Q9NRR3 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
CDC42SE2Q9NRR3 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CDC42SE2Q9NRR3 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC12.03□□□□□ -0.48
CDC42SE2Q9NRR3 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CDC42SE2Q9NRR3 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
CDC42SE2Q9NRR3 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms