Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.93■□□□□ 0.14
NPAS1Q99742 HLA-J-201ENST00000462773 1622 ntBASIC15.93■□□□□ 0.14
NPAS1Q99742 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPAS1Q99742 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
NPAS1Q99742 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPAS1Q99742 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
NPAS1Q99742 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPAS1Q99742 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.93■□□□□ 0.14
NPAS1Q99742 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPAS1Q99742 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPAS1Q99742 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPAS1Q99742 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPAS1Q99742 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NPAS1Q99742 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
NPAS1Q99742 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPAS1Q99742 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPAS1Q99742 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPAS1Q99742 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPAS1Q99742 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPAS1Q99742 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.92■□□□□ 0.14
NPAS1Q99742 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.92■□□□□ 0.14
NPAS1Q99742 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPAS1Q99742 AC132938.5-201ENST00000624980 1813 ntBASIC15.92■□□□□ 0.14
NPAS1Q99742 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPAS1Q99742 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NPAS1Q99742 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPAS1Q99742 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.92■□□□□ 0.14
NPAS1Q99742 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPAS1Q99742 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NPAS1Q99742 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPAS1Q99742 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NPAS1Q99742 AL450487.1-201ENST00000426799 995 ntBASIC15.92■□□□□ 0.14
NPAS1Q99742 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.92■□□□□ 0.14
NPAS1Q99742 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.92■□□□□ 0.14
NPAS1Q99742 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.92■□□□□ 0.14
NPAS1Q99742 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.92■□□□□ 0.14
NPAS1Q99742 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
NPAS1Q99742 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPAS1Q99742 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.92■□□□□ 0.14
NPAS1Q99742 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
NPAS1Q99742 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.92■□□□□ 0.14
NPAS1Q99742 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPAS1Q99742 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPAS1Q99742 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
NPAS1Q99742 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPAS1Q99742 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NPAS1Q99742 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NPAS1Q99742 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.92■□□□□ 0.14
NPAS1Q99742 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.92■□□□□ 0.14
NPAS1Q99742 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NPAS1Q99742 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.92■□□□□ 0.14
NPAS1Q99742 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPAS1Q99742 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPAS1Q99742 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPAS1Q99742 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.92■□□□□ 0.14
NPAS1Q99742 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPAS1Q99742 PCDHA12-202ENST00000613593 2588 ntBASIC15.91■□□□□ 0.14
NPAS1Q99742 AL353593.2-201ENST00000602529 1483 ntBASIC15.91■□□□□ 0.14
NPAS1Q99742 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS1Q99742 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS1Q99742 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
NPAS1Q99742 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS1Q99742 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS1Q99742 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.91■□□□□ 0.14
NPAS1Q99742 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS1Q99742 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS1Q99742 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS1Q99742 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS1Q99742 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS1Q99742 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS1Q99742 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS1Q99742 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
NPAS1Q99742 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS1Q99742 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
NPAS1Q99742 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS1Q99742 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.91■□□□□ 0.14
NPAS1Q99742 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.91■□□□□ 0.14
NPAS1Q99742 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.91■□□□□ 0.14
NPAS1Q99742 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS1Q99742 AF238378.1-201ENST00000526806 358 ntBASIC15.91■□□□□ 0.14
NPAS1Q99742 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.91■□□□□ 0.14
NPAS1Q99742 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.91■□□□□ 0.14
NPAS1Q99742 AL121894.2-201ENST00000602977 491 ntBASIC15.91■□□□□ 0.14
NPAS1Q99742 AL691432.3-201ENST00000621860 400 ntBASIC15.91■□□□□ 0.14
NPAS1Q99742 AP000867.4-201ENST00000641616 219 ntBASIC15.91■□□□□ 0.14
NPAS1Q99742 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS1Q99742 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS1Q99742 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS1Q99742 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS1Q99742 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
NPAS1Q99742 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
NPAS1Q99742 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
NPAS1Q99742 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
NPAS1Q99742 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
NPAS1Q99742 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
NPAS1Q99742 PMPCAP1-201ENST00000508114 1576 ntBASIC15.91■□□□□ 0.14
NPAS1Q99742 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS1Q99742 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS1Q99742 LYSMD4-203ENST00000378904 2122 ntBASIC15.91■□□□□ 0.14
NPAS1Q99742 AC004817.3-201ENST00000602957 2129 ntBASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms