Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
LITAFQ99732 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LITAFQ99732 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LITAFQ99732 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LITAFQ99732 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LITAFQ99732 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
LITAFQ99732 CDCA4P2-201ENST00000441182 718 ntBASIC11.63□□□□□ -0.55
LITAFQ99732 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LITAFQ99732 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC11.63□□□□□ -0.55
LITAFQ99732 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LITAFQ99732 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LITAFQ99732 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LITAFQ99732 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
LITAFQ99732 AL031985.4-201ENST00000642138 673 ntBASIC11.63□□□□□ -0.55
LITAFQ99732 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC11.63□□□□□ -0.55
LITAFQ99732 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LITAFQ99732 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
LITAFQ99732 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LITAFQ99732 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC11.63□□□□□ -0.55
LITAFQ99732 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LITAFQ99732 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LITAFQ99732 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
LITAFQ99732 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
LITAFQ99732 AMT-233ENST00000636522 1620 ntTSL 2 BASIC11.63□□□□□ -0.55
LITAFQ99732 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
LITAFQ99732 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
LITAFQ99732 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LITAFQ99732 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LITAFQ99732 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LITAFQ99732 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LITAFQ99732 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LITAFQ99732 CROCCP1-201ENST00000426910 5675 ntBASIC11.63□□□□□ -0.55
LITAFQ99732 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
LITAFQ99732 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
LITAFQ99732 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LITAFQ99732 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
LITAFQ99732 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
LITAFQ99732 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC11.63□□□□□ -0.55
LITAFQ99732 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC11.63□□□□□ -0.55
LITAFQ99732 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LITAFQ99732 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LITAFQ99732 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LITAFQ99732 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
LITAFQ99732 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
LITAFQ99732 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
LITAFQ99732 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LITAFQ99732 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
LITAFQ99732 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
LITAFQ99732 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC11.62□□□□□ -0.55
LITAFQ99732 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC11.62□□□□□ -0.55
LITAFQ99732 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
LITAFQ99732 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC11.62□□□□□ -0.55
LITAFQ99732 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
LITAFQ99732 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
LITAFQ99732 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC11.62□□□□□ -0.55
LITAFQ99732 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC11.62□□□□□ -0.55
LITAFQ99732 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LITAFQ99732 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LITAFQ99732 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC11.62□□□□□ -0.55
LITAFQ99732 BX276092.7-203ENST00000637198 1536 ntBASIC11.62□□□□□ -0.55
LITAFQ99732 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LITAFQ99732 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LITAFQ99732 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LITAFQ99732 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC11.62□□□□□ -0.55
LITAFQ99732 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
LITAFQ99732 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
LITAFQ99732 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LITAFQ99732 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
LITAFQ99732 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC11.62□□□□□ -0.55
LITAFQ99732 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
LITAFQ99732 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC11.62□□□□□ -0.55
LITAFQ99732 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC11.62□□□□□ -0.55
LITAFQ99732 AP000692.2-201ENST00000608391 879 ntBASIC11.62□□□□□ -0.55
LITAFQ99732 AC080038.1-201ENST00000611274 1154 ntBASIC11.62□□□□□ -0.55
LITAFQ99732 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LITAFQ99732 INO80E-214ENST00000620599 515 ntTSL 2 BASIC11.62□□□□□ -0.55
LITAFQ99732 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
LITAFQ99732 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LITAFQ99732 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LITAFQ99732 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LITAFQ99732 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LITAFQ99732 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC11.62□□□□□ -0.55
LITAFQ99732 AC096733.2-201ENST00000609937 1394 ntBASIC11.62□□□□□ -0.55
LITAFQ99732 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
LITAFQ99732 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LITAFQ99732 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LITAFQ99732 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LITAFQ99732 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LITAFQ99732 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC11.62□□□□□ -0.55
LITAFQ99732 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LITAFQ99732 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LITAFQ99732 OR6D1P-203ENST00000641209 4860 ntBASIC11.61□□□□□ -0.55
LITAFQ99732 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC11.61□□□□□ -0.55
LITAFQ99732 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LITAFQ99732 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LITAFQ99732 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LITAFQ99732 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LITAFQ99732 KRT16P1-201ENST00000399124 1418 ntBASIC11.61□□□□□ -0.55
LITAFQ99732 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LITAFQ99732 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms