Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SYNGAP1Q96PV0 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
SYNGAP1Q96PV0 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SYNGAP1Q96PV0 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SYNGAP1Q96PV0 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SYNGAP1Q96PV0 KRT18P28-201ENST00000453838 1332 ntBASIC19.81■□□□□ 0.76
SYNGAP1Q96PV0 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SYNGAP1Q96PV0 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SYNGAP1Q96PV0 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SYNGAP1Q96PV0 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.8■□□□□ 0.76
SYNGAP1Q96PV0 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SYNGAP1Q96PV0 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SYNGAP1Q96PV0 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SYNGAP1Q96PV0 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SYNGAP1Q96PV0 AP002414.1-201ENST00000391405 1147 ntBASIC19.8■□□□□ 0.76
SYNGAP1Q96PV0 MRPL20P1-201ENST00000400819 433 ntBASIC19.8■□□□□ 0.76
SYNGAP1Q96PV0 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
SYNGAP1Q96PV0 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.8■□□□□ 0.76
SYNGAP1Q96PV0 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.8■□□□□ 0.76
SYNGAP1Q96PV0 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.8■□□□□ 0.76
SYNGAP1Q96PV0 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SYNGAP1Q96PV0 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SYNGAP1Q96PV0 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.8■□□□□ 0.76
SYNGAP1Q96PV0 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
SYNGAP1Q96PV0 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.8■□□□□ 0.76
SYNGAP1Q96PV0 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SYNGAP1Q96PV0 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SYNGAP1Q96PV0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SYNGAP1Q96PV0 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SYNGAP1Q96PV0 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SYNGAP1Q96PV0 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
SYNGAP1Q96PV0 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SYNGAP1Q96PV0 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SYNGAP1Q96PV0 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SYNGAP1Q96PV0 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SYNGAP1Q96PV0 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.8■□□□□ 0.76
SYNGAP1Q96PV0 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SYNGAP1Q96PV0 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SYNGAP1Q96PV0 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SYNGAP1Q96PV0 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SYNGAP1Q96PV0 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SYNGAP1Q96PV0 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.79■□□□□ 0.76
SYNGAP1Q96PV0 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SYNGAP1Q96PV0 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SYNGAP1Q96PV0 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.79■□□□□ 0.76
SYNGAP1Q96PV0 SNHG9-202ENST00000564014 471 ntBASIC19.79■□□□□ 0.76
SYNGAP1Q96PV0 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SYNGAP1Q96PV0 AL353135.1-201ENST00000606729 504 ntBASIC19.79■□□□□ 0.76
SYNGAP1Q96PV0 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
SYNGAP1Q96PV0 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.79■□□□□ 0.76
SYNGAP1Q96PV0 FLJ13224-201ENST00000313737 1514 ntBASIC19.79■□□□□ 0.76
SYNGAP1Q96PV0 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.79■□□□□ 0.76
SYNGAP1Q96PV0 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SYNGAP1Q96PV0 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
SYNGAP1Q96PV0 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SYNGAP1Q96PV0 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SYNGAP1Q96PV0 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
SYNGAP1Q96PV0 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SYNGAP1Q96PV0 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SYNGAP1Q96PV0 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SYNGAP1Q96PV0 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SYNGAP1Q96PV0 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SYNGAP1Q96PV0 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SYNGAP1Q96PV0 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
SYNGAP1Q96PV0 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SYNGAP1Q96PV0 METTL21AP1-201ENST00000438852 635 ntBASIC19.78■□□□□ 0.76
SYNGAP1Q96PV0 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
SYNGAP1Q96PV0 AC002558.1-201ENST00000488906 803 ntBASIC19.78■□□□□ 0.76
SYNGAP1Q96PV0 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.78■□□□□ 0.76
SYNGAP1Q96PV0 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
SYNGAP1Q96PV0 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.78■□□□□ 0.76
SYNGAP1Q96PV0 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.78■□□□□ 0.76
SYNGAP1Q96PV0 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.78■□□□□ 0.76
SYNGAP1Q96PV0 GGTLC5P-201ENST00000617623 998 ntBASIC19.78■□□□□ 0.76
SYNGAP1Q96PV0 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.78■□□□□ 0.76
SYNGAP1Q96PV0 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SYNGAP1Q96PV0 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SYNGAP1Q96PV0 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SYNGAP1Q96PV0 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
SYNGAP1Q96PV0 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SYNGAP1Q96PV0 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SYNGAP1Q96PV0 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SYNGAP1Q96PV0 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.78■□□□□ 0.76
SYNGAP1Q96PV0 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SYNGAP1Q96PV0 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.78■□□□□ 0.76
SYNGAP1Q96PV0 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SYNGAP1Q96PV0 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.78■□□□□ 0.76
SYNGAP1Q96PV0 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SYNGAP1Q96PV0 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SYNGAP1Q96PV0 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.78■□□□□ 0.76
SYNGAP1Q96PV0 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SYNGAP1Q96PV0 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.78■□□□□ 0.76
SYNGAP1Q96PV0 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SYNGAP1Q96PV0 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SYNGAP1Q96PV0 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SYNGAP1Q96PV0 ELL2P1-201ENST00000413990 1906 ntBASIC19.78■□□□□ 0.76
SYNGAP1Q96PV0 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.78■□□□□ 0.76
SYNGAP1Q96PV0 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.78■□□□□ 0.76
SYNGAP1Q96PV0 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SYNGAP1Q96PV0 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms