Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.53■□□□□ 0.4
SHDQ96IW2 AL512638.1-201ENST00000457493 794 ntBASIC17.53■□□□□ 0.4
SHDQ96IW2 AC125807.1-201ENST00000483097 614 ntBASIC17.53■□□□□ 0.4
SHDQ96IW2 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.53■□□□□ 0.4
SHDQ96IW2 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.53■□□□□ 0.4
SHDQ96IW2 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.53■□□□□ 0.4
SHDQ96IW2 RARRES2P8-201ENST00000566335 367 ntBASIC17.53■□□□□ 0.4
SHDQ96IW2 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHDQ96IW2 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.53■□□□□ 0.4
SHDQ96IW2 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.53■□□□□ 0.4
SHDQ96IW2 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHDQ96IW2 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SHDQ96IW2 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SHDQ96IW2 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHDQ96IW2 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SHDQ96IW2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SHDQ96IW2 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHDQ96IW2 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
SHDQ96IW2 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
SHDQ96IW2 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SHDQ96IW2 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHDQ96IW2 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.53■□□□□ 0.4
SHDQ96IW2 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHDQ96IW2 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHDQ96IW2 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHDQ96IW2 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SHDQ96IW2 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SHDQ96IW2 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.52■□□□□ 0.4
SHDQ96IW2 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHDQ96IW2 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.52■□□□□ 0.4
SHDQ96IW2 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.52■□□□□ 0.4
SHDQ96IW2 SPDYE7P-202ENST00000420373 878 ntBASIC17.52■□□□□ 0.4
SHDQ96IW2 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.52■□□□□ 0.4
SHDQ96IW2 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHDQ96IW2 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHDQ96IW2 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHDQ96IW2 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHDQ96IW2 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHDQ96IW2 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.52■□□□□ 0.4
SHDQ96IW2 IGHV3-62-201ENST00000520057 340 ntBASIC17.52■□□□□ 0.4
SHDQ96IW2 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.52■□□□□ 0.4
SHDQ96IW2 AC140878.1-201ENST00000565277 250 ntBASIC17.52■□□□□ 0.4
SHDQ96IW2 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.52■□□□□ 0.4
SHDQ96IW2 AC027307.3-201ENST00000594262 1100 ntBASIC17.52■□□□□ 0.4
SHDQ96IW2 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.52■□□□□ 0.4
SHDQ96IW2 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.52■□□□□ 0.4
SHDQ96IW2 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHDQ96IW2 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.52■□□□□ 0.4
SHDQ96IW2 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.52■□□□□ 0.4
SHDQ96IW2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
SHDQ96IW2 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.39
SHDQ96IW2 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
SHDQ96IW2 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.52■□□□□ 0.39
SHDQ96IW2 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SHDQ96IW2 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SHDQ96IW2 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.52■□□□□ 0.39
SHDQ96IW2 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SHDQ96IW2 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SHDQ96IW2 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.52■□□□□ 0.39
SHDQ96IW2 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHDQ96IW2 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.51■□□□□ 0.39
SHDQ96IW2 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
SHDQ96IW2 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
SHDQ96IW2 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.51■□□□□ 0.39
SHDQ96IW2 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.51■□□□□ 0.39
SHDQ96IW2 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHDQ96IW2 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.51■□□□□ 0.39
SHDQ96IW2 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.51■□□□□ 0.39
SHDQ96IW2 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SHDQ96IW2 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHDQ96IW2 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SHDQ96IW2 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.51■□□□□ 0.39
SHDQ96IW2 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SHDQ96IW2 RBPMS2P1-201ENST00000437762 623 ntBASIC17.51■□□□□ 0.39
SHDQ96IW2 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.51■□□□□ 0.39
SHDQ96IW2 GAPDHP21-201ENST00000450301 1010 ntBASIC17.51■□□□□ 0.39
SHDQ96IW2 AC087163.2-201ENST00000457299 853 ntBASIC17.51■□□□□ 0.39
SHDQ96IW2 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.51■□□□□ 0.39
SHDQ96IW2 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.51■□□□□ 0.39
SHDQ96IW2 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHDQ96IW2 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.51■□□□□ 0.39
SHDQ96IW2 AC243562.1-201ENST00000560672 389 ntBASIC17.51■□□□□ 0.39
SHDQ96IW2 AL358472.5-202ENST00000641448 1267 ntBASIC17.51■□□□□ 0.39
SHDQ96IW2 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHDQ96IW2 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SHDQ96IW2 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.51■□□□□ 0.39
SHDQ96IW2 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHDQ96IW2 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SHDQ96IW2 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
SHDQ96IW2 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SHDQ96IW2 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SHDQ96IW2 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SHDQ96IW2 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHDQ96IW2 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.5■□□□□ 0.39
SHDQ96IW2 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SHDQ96IW2 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHDQ96IW2 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHDQ96IW2 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHDQ96IW2 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHDQ96IW2 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms