Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP6Q96FZ7 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP6Q96FZ7 AC046185.3-201ENST00000623228 1824 ntBASIC17.63■□□□□ 0.41
CHMP6Q96FZ7 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
CHMP6Q96FZ7 AC105917.1-201ENST00000506637 2539 ntBASIC17.63■□□□□ 0.41
CHMP6Q96FZ7 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP6Q96FZ7 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP6Q96FZ7 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.63■□□□□ 0.41
CHMP6Q96FZ7 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP6Q96FZ7 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.63■□□□□ 0.41
CHMP6Q96FZ7 ABHD17AP1-201ENST00000358206 933 ntBASIC17.63■□□□□ 0.41
CHMP6Q96FZ7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.63■□□□□ 0.41
CHMP6Q96FZ7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP6Q96FZ7 AC008040.2-201ENST00000461049 708 ntBASIC17.63■□□□□ 0.41
CHMP6Q96FZ7 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.63■□□□□ 0.41
CHMP6Q96FZ7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP6Q96FZ7 AC026271.3-201ENST00000571884 352 ntBASIC17.63■□□□□ 0.41
CHMP6Q96FZ7 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.63■□□□□ 0.41
CHMP6Q96FZ7 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP6Q96FZ7 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP6Q96FZ7 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP6Q96FZ7 AC068418.2-201ENST00000577309 3703 ntBASIC17.63■□□□□ 0.41
CHMP6Q96FZ7 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.63■□□□□ 0.41
CHMP6Q96FZ7 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP6Q96FZ7 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
CHMP6Q96FZ7 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP6Q96FZ7 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP6Q96FZ7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP6Q96FZ7 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP6Q96FZ7 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP6Q96FZ7 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.62■□□□□ 0.41
CHMP6Q96FZ7 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP6Q96FZ7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP6Q96FZ7 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.62■□□□□ 0.41
CHMP6Q96FZ7 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP6Q96FZ7 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP6Q96FZ7 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP6Q96FZ7 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP6Q96FZ7 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP6Q96FZ7 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP6Q96FZ7 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.62■□□□□ 0.41
CHMP6Q96FZ7 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
CHMP6Q96FZ7 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP6Q96FZ7 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP6Q96FZ7 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP6Q96FZ7 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP6Q96FZ7 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP6Q96FZ7 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP6Q96FZ7 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP6Q96FZ7 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.62■□□□□ 0.41
CHMP6Q96FZ7 AC009065.1-201ENST00000564055 1225 ntBASIC17.62■□□□□ 0.41
CHMP6Q96FZ7 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.62■□□□□ 0.41
CHMP6Q96FZ7 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP6Q96FZ7 AP001412.1-201ENST00000608405 714 ntBASIC17.62■□□□□ 0.41
CHMP6Q96FZ7 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP6Q96FZ7 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP6Q96FZ7 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP6Q96FZ7 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
CHMP6Q96FZ7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.62■□□□□ 0.41
CHMP6Q96FZ7 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP6Q96FZ7 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP6Q96FZ7 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.62■□□□□ 0.41
CHMP6Q96FZ7 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP6Q96FZ7 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP6Q96FZ7 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP6Q96FZ7 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CHMP6Q96FZ7 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.62■□□□□ 0.41
CHMP6Q96FZ7 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP6Q96FZ7 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP6Q96FZ7 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CHMP6Q96FZ7 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CHMP6Q96FZ7 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP6Q96FZ7 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP6Q96FZ7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.61■□□□□ 0.41
CHMP6Q96FZ7 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP6Q96FZ7 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP6Q96FZ7 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.61■□□□□ 0.41
CHMP6Q96FZ7 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP6Q96FZ7 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CHMP6Q96FZ7 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP6Q96FZ7 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CHMP6Q96FZ7 LYSMD4-203ENST00000378904 2122 ntBASIC17.61■□□□□ 0.41
CHMP6Q96FZ7 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP6Q96FZ7 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.61■□□□□ 0.41
CHMP6Q96FZ7 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.61■□□□□ 0.41
CHMP6Q96FZ7 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.61■□□□□ 0.41
CHMP6Q96FZ7 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.61■□□□□ 0.41
CHMP6Q96FZ7 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP6Q96FZ7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
CHMP6Q96FZ7 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP6Q96FZ7 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
CHMP6Q96FZ7 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.61■□□□□ 0.41
CHMP6Q96FZ7 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CHMP6Q96FZ7 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.61■□□□□ 0.41
CHMP6Q96FZ7 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP6Q96FZ7 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP6Q96FZ7 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP6Q96FZ7 AL662844.4-201ENST00000606367 2838 ntBASIC17.61■□□□□ 0.41
CHMP6Q96FZ7 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.61■□□□□ 0.41
CHMP6Q96FZ7 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms