Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.04■□□□□ 0.48
IFT43Q96FT9 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
IFT43Q96FT9 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
IFT43Q96FT9 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
IFT43Q96FT9 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
IFT43Q96FT9 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
IFT43Q96FT9 FOSL1P1-201ENST00000511041 816 ntBASIC18.04■□□□□ 0.48
IFT43Q96FT9 AC074051.2-201ENST00000565115 352 ntBASIC18.04■□□□□ 0.48
IFT43Q96FT9 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.04■□□□□ 0.48
IFT43Q96FT9 AC011840.4-201ENST00000578471 627 ntBASIC18.04■□□□□ 0.48
IFT43Q96FT9 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.04■□□□□ 0.48
IFT43Q96FT9 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
IFT43Q96FT9 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.04■□□□□ 0.48
IFT43Q96FT9 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
IFT43Q96FT9 AC009949.1-201ENST00000623048 1830 ntBASIC18.04■□□□□ 0.48
IFT43Q96FT9 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
IFT43Q96FT9 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
IFT43Q96FT9 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
IFT43Q96FT9 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
IFT43Q96FT9 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
IFT43Q96FT9 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
IFT43Q96FT9 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
IFT43Q96FT9 AC006116.8-202ENST00000587620 1550 ntBASIC18.04■□□□□ 0.48
IFT43Q96FT9 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
IFT43Q96FT9 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.04■□□□□ 0.48
IFT43Q96FT9 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
IFT43Q96FT9 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
IFT43Q96FT9 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.03■□□□□ 0.48
IFT43Q96FT9 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.03■□□□□ 0.48
IFT43Q96FT9 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IFT43Q96FT9 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
IFT43Q96FT9 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IFT43Q96FT9 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
IFT43Q96FT9 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IFT43Q96FT9 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
IFT43Q96FT9 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IFT43Q96FT9 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
IFT43Q96FT9 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
IFT43Q96FT9 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
IFT43Q96FT9 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IFT43Q96FT9 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
IFT43Q96FT9 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.03■□□□□ 0.48
IFT43Q96FT9 IGHV3-47-201ENST00000425060 335 ntBASIC18.03■□□□□ 0.48
IFT43Q96FT9 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.03■□□□□ 0.48
IFT43Q96FT9 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.03■□□□□ 0.48
IFT43Q96FT9 AL732292.2-201ENST00000609649 430 ntBASIC18.03■□□□□ 0.48
IFT43Q96FT9 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.03■□□□□ 0.48
IFT43Q96FT9 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IFT43Q96FT9 KRT8P10-201ENST00000450021 1447 ntBASIC18.03■□□□□ 0.48
IFT43Q96FT9 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
IFT43Q96FT9 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
IFT43Q96FT9 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IFT43Q96FT9 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
IFT43Q96FT9 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
IFT43Q96FT9 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.03■□□□□ 0.48
IFT43Q96FT9 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
IFT43Q96FT9 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
IFT43Q96FT9 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
IFT43Q96FT9 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
IFT43Q96FT9 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
IFT43Q96FT9 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
IFT43Q96FT9 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
IFT43Q96FT9 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
IFT43Q96FT9 AL645608.8-201ENST00000606034 2086 ntBASIC18.02■□□□□ 0.48
IFT43Q96FT9 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
IFT43Q96FT9 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
IFT43Q96FT9 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
IFT43Q96FT9 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
IFT43Q96FT9 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
IFT43Q96FT9 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.02■□□□□ 0.48
IFT43Q96FT9 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
IFT43Q96FT9 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
IFT43Q96FT9 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
IFT43Q96FT9 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.02■□□□□ 0.48
IFT43Q96FT9 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.02■□□□□ 0.48
IFT43Q96FT9 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
IFT43Q96FT9 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
IFT43Q96FT9 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
IFT43Q96FT9 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
IFT43Q96FT9 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
IFT43Q96FT9 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
IFT43Q96FT9 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
IFT43Q96FT9 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
IFT43Q96FT9 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
IFT43Q96FT9 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.01■□□□□ 0.47
IFT43Q96FT9 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.01■□□□□ 0.47
IFT43Q96FT9 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IFT43Q96FT9 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IFT43Q96FT9 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
IFT43Q96FT9 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
IFT43Q96FT9 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
IFT43Q96FT9 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IFT43Q96FT9 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IFT43Q96FT9 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IFT43Q96FT9 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
IFT43Q96FT9 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IFT43Q96FT9 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
IFT43Q96FT9 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.01■□□□□ 0.47
IFT43Q96FT9 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IFT43Q96FT9 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms