Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
DDX11Q96FC9 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
DDX11Q96FC9 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX11Q96FC9 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DDX11Q96FC9 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX11Q96FC9 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.75■□□□□ 0.91
DDX11Q96FC9 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DDX11Q96FC9 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DDX11Q96FC9 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DDX11Q96FC9 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
DDX11Q96FC9 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX11Q96FC9 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.75■□□□□ 0.91
DDX11Q96FC9 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX11Q96FC9 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.75■□□□□ 0.91
DDX11Q96FC9 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX11Q96FC9 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
DDX11Q96FC9 AC133963.1-201ENST00000504166 1679 ntBASIC20.75■□□□□ 0.91
DDX11Q96FC9 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
DDX11Q96FC9 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
DDX11Q96FC9 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.75■□□□□ 0.91
DDX11Q96FC9 AC132008.2-207ENST00000454517 770 ntBASIC20.75■□□□□ 0.91
DDX11Q96FC9 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DDX11Q96FC9 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.75■□□□□ 0.91
DDX11Q96FC9 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.75■□□□□ 0.91
DDX11Q96FC9 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.75■□□□□ 0.91
DDX11Q96FC9 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.75■□□□□ 0.91
DDX11Q96FC9 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.75■□□□□ 0.91
DDX11Q96FC9 AC120114.3-201ENST00000611923 658 ntBASIC20.75■□□□□ 0.91
DDX11Q96FC9 AC116407.2-201ENST00000613639 860 ntBASIC20.75■□□□□ 0.91
DDX11Q96FC9 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
DDX11Q96FC9 TP73-AS1-207ENST00000624167 988 ntBASIC20.75■□□□□ 0.91
DDX11Q96FC9 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DDX11Q96FC9 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DDX11Q96FC9 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DDX11Q96FC9 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
DDX11Q96FC9 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DDX11Q96FC9 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX11Q96FC9 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
DDX11Q96FC9 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.74■□□□□ 0.91
DDX11Q96FC9 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
DDX11Q96FC9 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX11Q96FC9 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.74■□□□□ 0.91
DDX11Q96FC9 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.74■□□□□ 0.91
DDX11Q96FC9 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX11Q96FC9 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX11Q96FC9 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX11Q96FC9 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX11Q96FC9 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.74■□□□□ 0.91
DDX11Q96FC9 AL590627.1-203ENST00000421194 1026 ntBASIC20.74■□□□□ 0.91
DDX11Q96FC9 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
DDX11Q96FC9 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX11Q96FC9 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
DDX11Q96FC9 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DDX11Q96FC9 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.74■□□□□ 0.91
DDX11Q96FC9 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.74■□□□□ 0.91
DDX11Q96FC9 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.74■□□□□ 0.91
DDX11Q96FC9 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.74■□□□□ 0.91
DDX11Q96FC9 AP001005.1-201ENST00000571755 1248 ntBASIC20.74■□□□□ 0.91
DDX11Q96FC9 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.74■□□□□ 0.91
DDX11Q96FC9 BX640515.1-201ENST00000617215 977 ntBASIC20.74■□□□□ 0.91
DDX11Q96FC9 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DDX11Q96FC9 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX11Q96FC9 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX11Q96FC9 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX11Q96FC9 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX11Q96FC9 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
DDX11Q96FC9 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX11Q96FC9 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX11Q96FC9 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.73■□□□□ 0.91
DDX11Q96FC9 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.73■□□□□ 0.91
DDX11Q96FC9 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DDX11Q96FC9 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DDX11Q96FC9 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX11Q96FC9 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DDX11Q96FC9 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX11Q96FC9 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.73■□□□□ 0.91
DDX11Q96FC9 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX11Q96FC9 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX11Q96FC9 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX11Q96FC9 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DDX11Q96FC9 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
DDX11Q96FC9 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
DDX11Q96FC9 MTCL1P1-201ENST00000446207 792 ntBASIC20.73■□□□□ 0.91
DDX11Q96FC9 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.73■□□□□ 0.91
DDX11Q96FC9 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.73■□□□□ 0.91
DDX11Q96FC9 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.73■□□□□ 0.91
DDX11Q96FC9 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.73■□□□□ 0.91
DDX11Q96FC9 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.73■□□□□ 0.91
DDX11Q96FC9 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DDX11Q96FC9 AL773604.1-201ENST00000617417 272 ntBASIC20.73■□□□□ 0.91
DDX11Q96FC9 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
DDX11Q96FC9 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX11Q96FC9 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DDX11Q96FC9 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DDX11Q96FC9 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX11Q96FC9 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX11Q96FC9 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DDX11Q96FC9 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.72■□□□□ 0.91
DDX11Q96FC9 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDX11Q96FC9 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms