Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIM11Q96F44 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM11Q96F44 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM11Q96F44 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
TRIM11Q96F44 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.47■□□□□ 0.55
TRIM11Q96F44 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM11Q96F44 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM11Q96F44 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM11Q96F44 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM11Q96F44 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.47■□□□□ 0.55
TRIM11Q96F44 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM11Q96F44 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.47■□□□□ 0.55
TRIM11Q96F44 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM11Q96F44 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.47■□□□□ 0.55
TRIM11Q96F44 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
TRIM11Q96F44 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.47■□□□□ 0.55
TRIM11Q96F44 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM11Q96F44 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM11Q96F44 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.47■□□□□ 0.55
TRIM11Q96F44 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM11Q96F44 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM11Q96F44 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM11Q96F44 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.47■□□□□ 0.55
TRIM11Q96F44 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM11Q96F44 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM11Q96F44 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM11Q96F44 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM11Q96F44 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TRIM11Q96F44 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.47■□□□□ 0.55
TRIM11Q96F44 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.47■□□□□ 0.55
TRIM11Q96F44 STK25P1-201ENST00000585406 838 ntBASIC18.47■□□□□ 0.55
TRIM11Q96F44 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM11Q96F44 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.47■□□□□ 0.55
TRIM11Q96F44 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM11Q96F44 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM11Q96F44 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TRIM11Q96F44 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TRIM11Q96F44 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
TRIM11Q96F44 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM11Q96F44 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
TRIM11Q96F44 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM11Q96F44 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM11Q96F44 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM11Q96F44 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM11Q96F44 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
TRIM11Q96F44 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM11Q96F44 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM11Q96F44 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.46■□□□□ 0.55
TRIM11Q96F44 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.46■□□□□ 0.55
TRIM11Q96F44 AC093525.9-201ENST00000624961 1746 ntBASIC18.46■□□□□ 0.55
TRIM11Q96F44 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
TRIM11Q96F44 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM11Q96F44 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM11Q96F44 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.46■□□□□ 0.55
TRIM11Q96F44 AC016734.2-201ENST00000624325 1377 ntBASIC18.46■□□□□ 0.55
TRIM11Q96F44 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM11Q96F44 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM11Q96F44 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM11Q96F44 FAM210CP-201ENST00000445714 574 ntBASIC18.46■□□□□ 0.55
TRIM11Q96F44 AC011467.2-201ENST00000598425 242 ntBASIC18.46■□□□□ 0.55
TRIM11Q96F44 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.46■□□□□ 0.55
TRIM11Q96F44 AC116407.4-201ENST00000623319 1061 ntBASIC18.46■□□□□ 0.55
TRIM11Q96F44 AL590326.2-201ENST00000625139 305 ntBASIC18.46■□□□□ 0.55
TRIM11Q96F44 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM11Q96F44 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM11Q96F44 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM11Q96F44 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.46■□□□□ 0.55
TRIM11Q96F44 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM11Q96F44 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM11Q96F44 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM11Q96F44 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM11Q96F44 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM11Q96F44 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.46■□□□□ 0.55
TRIM11Q96F44 LINC02012-201ENST00000608206 1725 ntBASIC18.46■□□□□ 0.55
TRIM11Q96F44 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.46■□□□□ 0.54
TRIM11Q96F44 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.46■□□□□ 0.54
TRIM11Q96F44 AL353593.2-201ENST00000602529 1483 ntBASIC18.46■□□□□ 0.54
TRIM11Q96F44 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM11Q96F44 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM11Q96F44 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TRIM11Q96F44 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM11Q96F44 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM11Q96F44 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM11Q96F44 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM11Q96F44 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM11Q96F44 AC012313.1-201ENST00000593393 3059 ntBASIC18.45■□□□□ 0.54
TRIM11Q96F44 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.45■□□□□ 0.54
TRIM11Q96F44 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
TRIM11Q96F44 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM11Q96F44 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.45■□□□□ 0.54
TRIM11Q96F44 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.45■□□□□ 0.54
TRIM11Q96F44 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM11Q96F44 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TRIM11Q96F44 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.45■□□□□ 0.54
TRIM11Q96F44 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM11Q96F44 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.45■□□□□ 0.54
TRIM11Q96F44 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TRIM11Q96F44 TSSC2-201ENST00000450217 709 ntBASIC18.45■□□□□ 0.54
TRIM11Q96F44 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.45■□□□□ 0.54
TRIM11Q96F44 Z69720.1-201ENST00000601483 472 ntBASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms