Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHC3Q92529 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHC3Q92529 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SHC3Q92529 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SHC3Q92529 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHC3Q92529 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHC3Q92529 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SHC3Q92529 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SHC3Q92529 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHC3Q92529 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHC3Q92529 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SHC3Q92529 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.62■□□□□ 0.57
SHC3Q92529 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHC3Q92529 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SHC3Q92529 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHC3Q92529 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SHC3Q92529 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHC3Q92529 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHC3Q92529 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHC3Q92529 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHC3Q92529 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.61■□□□□ 0.57
SHC3Q92529 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.61■□□□□ 0.57
SHC3Q92529 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.61■□□□□ 0.57
SHC3Q92529 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SHC3Q92529 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHC3Q92529 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.61■□□□□ 0.57
SHC3Q92529 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
SHC3Q92529 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.61■□□□□ 0.57
SHC3Q92529 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.61■□□□□ 0.57
SHC3Q92529 AL121761.2-201ENST00000598007 1648 ntBASIC18.61■□□□□ 0.57
SHC3Q92529 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.61■□□□□ 0.57
SHC3Q92529 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SHC3Q92529 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHC3Q92529 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
SHC3Q92529 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SHC3Q92529 ABCD1P5-201ENST00000445663 754 ntBASIC18.61■□□□□ 0.57
SHC3Q92529 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.61■□□□□ 0.57
SHC3Q92529 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.61■□□□□ 0.57
SHC3Q92529 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.61■□□□□ 0.57
SHC3Q92529 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SHC3Q92529 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHC3Q92529 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHC3Q92529 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.61■□□□□ 0.57
SHC3Q92529 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHC3Q92529 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.61■□□□□ 0.57
SHC3Q92529 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SHC3Q92529 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHC3Q92529 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.6■□□□□ 0.57
SHC3Q92529 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.6■□□□□ 0.57
SHC3Q92529 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHC3Q92529 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.6■□□□□ 0.57
SHC3Q92529 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SHC3Q92529 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SHC3Q92529 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHC3Q92529 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.6■□□□□ 0.57
SHC3Q92529 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SHC3Q92529 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.6■□□□□ 0.57
SHC3Q92529 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SHC3Q92529 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.6■□□□□ 0.57
SHC3Q92529 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.6■□□□□ 0.57
SHC3Q92529 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.6■□□□□ 0.57
SHC3Q92529 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHC3Q92529 AC138894.3-201ENST00000603787 634 ntBASIC18.6■□□□□ 0.57
SHC3Q92529 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.6■□□□□ 0.57
SHC3Q92529 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHC3Q92529 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
SHC3Q92529 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SHC3Q92529 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SHC3Q92529 PCDHA12-202ENST00000613593 2588 ntBASIC18.6■□□□□ 0.57
SHC3Q92529 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
SHC3Q92529 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHC3Q92529 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHC3Q92529 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.6■□□□□ 0.57
SHC3Q92529 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHC3Q92529 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHC3Q92529 AC148477.5-201ENST00000625164 1645 ntBASIC18.6■□□□□ 0.57
SHC3Q92529 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SHC3Q92529 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SHC3Q92529 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SHC3Q92529 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHC3Q92529 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.59■□□□□ 0.57
SHC3Q92529 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
SHC3Q92529 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
SHC3Q92529 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHC3Q92529 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SHC3Q92529 AC060834.1-201ENST00000443027 2032 ntBASIC18.59■□□□□ 0.57
SHC3Q92529 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SHC3Q92529 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SHC3Q92529 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHC3Q92529 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SHC3Q92529 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.59■□□□□ 0.57
SHC3Q92529 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.59■□□□□ 0.57
SHC3Q92529 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
SHC3Q92529 SPDYE21P-201ENST00000413323 827 ntBASIC18.59■□□□□ 0.57
SHC3Q92529 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.59■□□□□ 0.57
SHC3Q92529 KRT16P4-201ENST00000453883 522 ntBASIC18.59■□□□□ 0.57
SHC3Q92529 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SHC3Q92529 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.59■□□□□ 0.57
SHC3Q92529 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHC3Q92529 AC073592.4-201ENST00000623827 446 ntBASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms