Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF138Q8WVD3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF138Q8WVD3 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RNF138Q8WVD3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF138Q8WVD3 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.7■□□□□ 0.1
RNF138Q8WVD3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF138Q8WVD3 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.7■□□□□ 0.1
RNF138Q8WVD3 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF138Q8WVD3 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF138Q8WVD3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF138Q8WVD3 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF138Q8WVD3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF138Q8WVD3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF138Q8WVD3 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF138Q8WVD3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF138Q8WVD3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF138Q8WVD3 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF138Q8WVD3 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF138Q8WVD3 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF138Q8WVD3 AC145285.3-201ENST00000564603 959 ntBASIC15.7■□□□□ 0.1
RNF138Q8WVD3 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF138Q8WVD3 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.7■□□□□ 0.1
RNF138Q8WVD3 MIR1199-201ENST00000621445 119 ntBASIC15.7■□□□□ 0.1
RNF138Q8WVD3 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.7■□□□□ 0.1
RNF138Q8WVD3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
RNF138Q8WVD3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.7■□□□□ 0.1
RNF138Q8WVD3 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF138Q8WVD3 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF138Q8WVD3 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.7■□□□□ 0.1
RNF138Q8WVD3 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF138Q8WVD3 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF138Q8WVD3 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF138Q8WVD3 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF138Q8WVD3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF138Q8WVD3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF138Q8WVD3 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF138Q8WVD3 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RNF138Q8WVD3 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF138Q8WVD3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF138Q8WVD3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF138Q8WVD3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF138Q8WVD3 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
RNF138Q8WVD3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF138Q8WVD3 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF138Q8WVD3 LETM1P2-201ENST00000597330 2178 ntBASIC15.69■□□□□ 0.1
RNF138Q8WVD3 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.69■□□□□ 0.1
RNF138Q8WVD3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF138Q8WVD3 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF138Q8WVD3 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.69■□□□□ 0.1
RNF138Q8WVD3 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.69■□□□□ 0.1
RNF138Q8WVD3 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF138Q8WVD3 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.69■□□□□ 0.1
RNF138Q8WVD3 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
RNF138Q8WVD3 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF138Q8WVD3 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.69■□□□□ 0.1
RNF138Q8WVD3 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.69■□□□□ 0.1
RNF138Q8WVD3 AC092910.1-201ENST00000482027 1129 ntBASIC15.69■□□□□ 0.1
RNF138Q8WVD3 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF138Q8WVD3 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.69■□□□□ 0.1
RNF138Q8WVD3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.69■□□□□ 0.1
RNF138Q8WVD3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.69■□□□□ 0.1
RNF138Q8WVD3 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF138Q8WVD3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF138Q8WVD3 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF138Q8WVD3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF138Q8WVD3 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF138Q8WVD3 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF138Q8WVD3 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF138Q8WVD3 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF138Q8WVD3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.69■□□□□ 0.1
RNF138Q8WVD3 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF138Q8WVD3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF138Q8WVD3 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF138Q8WVD3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF138Q8WVD3 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF138Q8WVD3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF138Q8WVD3 IL9RP2-201ENST00000423948 1312 ntBASIC15.68■□□□□ 0.1
RNF138Q8WVD3 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF138Q8WVD3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF138Q8WVD3 FRMD8P1-201ENST00000440433 1524 ntBASIC15.68■□□□□ 0.1
RNF138Q8WVD3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RNF138Q8WVD3 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF138Q8WVD3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF138Q8WVD3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF138Q8WVD3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RNF138Q8WVD3 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.68■□□□□ 0.1
RNF138Q8WVD3 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.68■□□□□ 0.1
RNF138Q8WVD3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RNF138Q8WVD3 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF138Q8WVD3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF138Q8WVD3 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF138Q8WVD3 AC108860.2-201ENST00000562760 2183 ntBASIC15.68■□□□□ 0.1
RNF138Q8WVD3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF138Q8WVD3 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF138Q8WVD3 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF138Q8WVD3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF138Q8WVD3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF138Q8WVD3 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF138Q8WVD3 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.68■□□□□ 0.1
RNF138Q8WVD3 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms