Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAF3IP1Q8TDR0 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TRAF3IP1Q8TDR0 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
TRAF3IP1Q8TDR0 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAF3IP1Q8TDR0 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAF3IP1Q8TDR0 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAF3IP1Q8TDR0 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.23■□□□□ 0.51
TRAF3IP1Q8TDR0 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAF3IP1Q8TDR0 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.23■□□□□ 0.51
TRAF3IP1Q8TDR0 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TRAF3IP1Q8TDR0 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAF3IP1Q8TDR0 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.23■□□□□ 0.51
TRAF3IP1Q8TDR0 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.23■□□□□ 0.51
TRAF3IP1Q8TDR0 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.23■□□□□ 0.51
TRAF3IP1Q8TDR0 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.23■□□□□ 0.51
TRAF3IP1Q8TDR0 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TRAF3IP1Q8TDR0 AL590326.2-201ENST00000625139 305 ntBASIC18.23■□□□□ 0.51
TRAF3IP1Q8TDR0 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.23■□□□□ 0.51
TRAF3IP1Q8TDR0 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAF3IP1Q8TDR0 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TRAF3IP1Q8TDR0 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAF3IP1Q8TDR0 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.23■□□□□ 0.51
TRAF3IP1Q8TDR0 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAF3IP1Q8TDR0 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
TRAF3IP1Q8TDR0 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TRAF3IP1Q8TDR0 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.23■□□□□ 0.51
TRAF3IP1Q8TDR0 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAF3IP1Q8TDR0 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAF3IP1Q8TDR0 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
TRAF3IP1Q8TDR0 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAF3IP1Q8TDR0 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAF3IP1Q8TDR0 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAF3IP1Q8TDR0 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAF3IP1Q8TDR0 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAF3IP1Q8TDR0 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAF3IP1Q8TDR0 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TRAF3IP1Q8TDR0 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
TRAF3IP1Q8TDR0 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
TRAF3IP1Q8TDR0 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAF3IP1Q8TDR0 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAF3IP1Q8TDR0 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAF3IP1Q8TDR0 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TRAF3IP1Q8TDR0 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAF3IP1Q8TDR0 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAF3IP1Q8TDR0 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TRAF3IP1Q8TDR0 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAF3IP1Q8TDR0 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.22■□□□□ 0.51
TRAF3IP1Q8TDR0 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.22■□□□□ 0.51
TRAF3IP1Q8TDR0 AC002558.1-201ENST00000488906 803 ntBASIC18.22■□□□□ 0.51
TRAF3IP1Q8TDR0 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAF3IP1Q8TDR0 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TRAF3IP1Q8TDR0 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAF3IP1Q8TDR0 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAF3IP1Q8TDR0 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.22■□□□□ 0.51
TRAF3IP1Q8TDR0 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAF3IP1Q8TDR0 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
TRAF3IP1Q8TDR0 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAF3IP1Q8TDR0 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAF3IP1Q8TDR0 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAF3IP1Q8TDR0 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAF3IP1Q8TDR0 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAF3IP1Q8TDR0 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.22■□□□□ 0.51
TRAF3IP1Q8TDR0 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAF3IP1Q8TDR0 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAF3IP1Q8TDR0 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAF3IP1Q8TDR0 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAF3IP1Q8TDR0 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAF3IP1Q8TDR0 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAF3IP1Q8TDR0 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAF3IP1Q8TDR0 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAF3IP1Q8TDR0 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TRAF3IP1Q8TDR0 F11R-206ENST00000621309 4770 ntTSL 5 BASIC18.21■□□□□ 0.51
TRAF3IP1Q8TDR0 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAF3IP1Q8TDR0 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAF3IP1Q8TDR0 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.21■□□□□ 0.51
TRAF3IP1Q8TDR0 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TRAF3IP1Q8TDR0 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TRAF3IP1Q8TDR0 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAF3IP1Q8TDR0 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.21■□□□□ 0.51
TRAF3IP1Q8TDR0 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TRAF3IP1Q8TDR0 CHCHD2P8-201ENST00000429873 447 ntBASIC18.21■□□□□ 0.51
TRAF3IP1Q8TDR0 AC007967.3-201ENST00000434308 558 ntBASIC18.21■□□□□ 0.51
TRAF3IP1Q8TDR0 IGHV3-52-201ENST00000519770 353 ntBASIC18.21■□□□□ 0.51
TRAF3IP1Q8TDR0 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.21■□□□□ 0.51
TRAF3IP1Q8TDR0 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.21■□□□□ 0.51
TRAF3IP1Q8TDR0 AL139327.4-201ENST00000612362 153 ntBASIC18.21■□□□□ 0.51
TRAF3IP1Q8TDR0 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.21■□□□□ 0.51
TRAF3IP1Q8TDR0 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAF3IP1Q8TDR0 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAF3IP1Q8TDR0 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAF3IP1Q8TDR0 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
TRAF3IP1Q8TDR0 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAF3IP1Q8TDR0 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.21■□□□□ 0.51
TRAF3IP1Q8TDR0 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAF3IP1Q8TDR0 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.21■□□□□ 0.5
TRAF3IP1Q8TDR0 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAF3IP1Q8TDR0 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TRAF3IP1Q8TDR0 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
TRAF3IP1Q8TDR0 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAF3IP1Q8TDR0 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms