Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 AC005786.4-201ENST00000623369 682 ntBASIC10.83□□□□□ -0.68
SVIPQ8NHG7 RSPH10B-208ENST00000539903 2881 ntTSL 5 BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 ACIN1-222ENST00000557515 2751 ntTSL 5 BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 MDH1B-201ENST00000374412 2553 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 RGL4-210ENST00000615003 3014 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 LILRB2-204ENST00000391749 2286 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 TNKS-213ENST00000522110 2900 ntBASIC10.83□□□□□ -0.68
SVIPQ8NHG7 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 AL592164.1-201ENST00000562814 1976 ntTSL 3 BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 BEND3P3-201ENST00000611030 2440 ntBASIC10.83□□□□□ -0.68
SVIPQ8NHG7 AL450468.2-201ENST00000565955 1889 ntBASIC10.83□□□□□ -0.68
SVIPQ8NHG7 THRAP3-201ENST00000354618 4432 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 ABT1-201ENST00000274849 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 FAM156B-203ENST00000593751 2942 ntAPPRIS P2 TSL 2 BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 FAM156A-201ENST00000596733 2942 ntAPPRIS P2 TSL 2 BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 ATG13-211ENST00000528494 2351 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 RAB7B-201ENST00000617070 2888 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 AC078925.4-201ENST00000623737 1717 ntBASIC10.82□□□□□ -0.68
SVIPQ8NHG7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 OPTN-206ENST00000378764 2498 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 HYOU1-217ENST00000612687 4360 ntTSL 5 BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 FCRLA-206ENST00000367949 1792 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 CLGN-201ENST00000325617 3043 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
SVIPQ8NHG7 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC10.81□□□□□ -0.68
SVIPQ8NHG7 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC10.81□□□□□ -0.68
SVIPQ8NHG7 MPP7-202ENST00000375719 2090 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SVIPQ8NHG7 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
SVIPQ8NHG7 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SVIPQ8NHG7 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
SVIPQ8NHG7 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC10.81□□□□□ -0.68
SVIPQ8NHG7 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SVIPQ8NHG7 ADD1-217ENST00000513328 3107 ntTSL 5 BASIC10.81□□□□□ -0.68
SVIPQ8NHG7 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SVIPQ8NHG7 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
SVIPQ8NHG7 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC10.81□□□□□ -0.68
SVIPQ8NHG7 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
SVIPQ8NHG7 C1orf127-201ENST00000377004 2761 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
SVIPQ8NHG7 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC10.81□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 157.5 ms