Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.29■□□□□ 0.36
TMEFF1Q8IYR6 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEFF1Q8IYR6 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEFF1Q8IYR6 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEFF1Q8IYR6 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TMEFF1Q8IYR6 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEFF1Q8IYR6 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.29■□□□□ 0.36
TMEFF1Q8IYR6 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.29■□□□□ 0.36
TMEFF1Q8IYR6 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEFF1Q8IYR6 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEFF1Q8IYR6 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
TMEFF1Q8IYR6 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEFF1Q8IYR6 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TMEFF1Q8IYR6 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TMEFF1Q8IYR6 NEFHP1-201ENST00000412845 2629 ntBASIC17.29■□□□□ 0.36
TMEFF1Q8IYR6 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEFF1Q8IYR6 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEFF1Q8IYR6 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEFF1Q8IYR6 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.29■□□□□ 0.36
TMEFF1Q8IYR6 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.29■□□□□ 0.36
TMEFF1Q8IYR6 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TMEFF1Q8IYR6 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.29■□□□□ 0.36
TMEFF1Q8IYR6 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.29■□□□□ 0.36
TMEFF1Q8IYR6 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.29■□□□□ 0.36
TMEFF1Q8IYR6 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.29■□□□□ 0.36
TMEFF1Q8IYR6 SPCS2P1-201ENST00000561636 679 ntBASIC17.29■□□□□ 0.36
TMEFF1Q8IYR6 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.29■□□□□ 0.36
TMEFF1Q8IYR6 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.29■□□□□ 0.36
TMEFF1Q8IYR6 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.29■□□□□ 0.36
TMEFF1Q8IYR6 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEFF1Q8IYR6 AC093512.1-201ENST00000617969 520 ntBASIC17.29■□□□□ 0.36
TMEFF1Q8IYR6 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
TMEFF1Q8IYR6 AC092902.6-201ENST00000641783 218 ntBASIC17.29■□□□□ 0.36
TMEFF1Q8IYR6 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEFF1Q8IYR6 AC135776.1-201ENST00000319817 2481 ntBASIC17.29■□□□□ 0.36
TMEFF1Q8IYR6 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TMEFF1Q8IYR6 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEFF1Q8IYR6 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEFF1Q8IYR6 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
TMEFF1Q8IYR6 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEFF1Q8IYR6 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEFF1Q8IYR6 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.28■□□□□ 0.36
TMEFF1Q8IYR6 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TMEFF1Q8IYR6 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TMEFF1Q8IYR6 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEFF1Q8IYR6 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TMEFF1Q8IYR6 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.28■□□□□ 0.36
TMEFF1Q8IYR6 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.28■□□□□ 0.36
TMEFF1Q8IYR6 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TMEFF1Q8IYR6 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEFF1Q8IYR6 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEFF1Q8IYR6 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TMEFF1Q8IYR6 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.28■□□□□ 0.36
TMEFF1Q8IYR6 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEFF1Q8IYR6 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TMEFF1Q8IYR6 AL035633.1-201ENST00000406139 838 ntBASIC17.28■□□□□ 0.36
TMEFF1Q8IYR6 AC004461.1-201ENST00000412461 403 ntBASIC17.28■□□□□ 0.36
TMEFF1Q8IYR6 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TMEFF1Q8IYR6 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TMEFF1Q8IYR6 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.28■□□□□ 0.36
TMEFF1Q8IYR6 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.28■□□□□ 0.36
TMEFF1Q8IYR6 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.28■□□□□ 0.36
TMEFF1Q8IYR6 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TMEFF1Q8IYR6 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.28■□□□□ 0.36
TMEFF1Q8IYR6 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.28■□□□□ 0.36
TMEFF1Q8IYR6 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TMEFF1Q8IYR6 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TMEFF1Q8IYR6 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEFF1Q8IYR6 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TMEFF1Q8IYR6 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEFF1Q8IYR6 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEFF1Q8IYR6 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.28■□□□□ 0.36
TMEFF1Q8IYR6 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEFF1Q8IYR6 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEFF1Q8IYR6 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
TMEFF1Q8IYR6 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEFF1Q8IYR6 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.27■□□□□ 0.36
TMEFF1Q8IYR6 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEFF1Q8IYR6 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TMEFF1Q8IYR6 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEFF1Q8IYR6 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms