Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SLX4Q8IY92 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC21.04■□□□□ 0.96
SLX4Q8IY92 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SLX4Q8IY92 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SLX4Q8IY92 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLX4Q8IY92 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC21.03■□□□□ 0.96
SLX4Q8IY92 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.03■□□□□ 0.96
SLX4Q8IY92 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SLX4Q8IY92 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLX4Q8IY92 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC21.03■□□□□ 0.96
SLX4Q8IY92 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC21.03■□□□□ 0.96
SLX4Q8IY92 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC21.03■□□□□ 0.96
SLX4Q8IY92 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC21.03■□□□□ 0.96
SLX4Q8IY92 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC21.03■□□□□ 0.96
SLX4Q8IY92 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC21.03■□□□□ 0.96
SLX4Q8IY92 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC21.03■□□□□ 0.96
SLX4Q8IY92 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLX4Q8IY92 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SLX4Q8IY92 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SLX4Q8IY92 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC21.03■□□□□ 0.96
SLX4Q8IY92 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SLX4Q8IY92 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLX4Q8IY92 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC21.03■□□□□ 0.96
SLX4Q8IY92 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SLX4Q8IY92 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLX4Q8IY92 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLX4Q8IY92 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SLX4Q8IY92 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLX4Q8IY92 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
SLX4Q8IY92 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC21.02■□□□□ 0.96
SLX4Q8IY92 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
SLX4Q8IY92 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLX4Q8IY92 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.02■□□□□ 0.96
SLX4Q8IY92 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
SLX4Q8IY92 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC21.02■□□□□ 0.96
SLX4Q8IY92 RN7SL692P-201ENST00000464677 288 ntBASIC21.02■□□□□ 0.96
SLX4Q8IY92 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC21.02■□□□□ 0.96
SLX4Q8IY92 ALG1L8P-201ENST00000533887 760 ntBASIC21.02■□□□□ 0.96
SLX4Q8IY92 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SLX4Q8IY92 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SLX4Q8IY92 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLX4Q8IY92 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLX4Q8IY92 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.95
SLX4Q8IY92 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
SLX4Q8IY92 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
SLX4Q8IY92 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SLX4Q8IY92 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLX4Q8IY92 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC21.01■□□□□ 0.95
SLX4Q8IY92 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC21.01■□□□□ 0.95
SLX4Q8IY92 TSSK5P-201ENST00000423978 907 ntBASIC21.01■□□□□ 0.95
SLX4Q8IY92 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC21.01■□□□□ 0.95
SLX4Q8IY92 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC21.01■□□□□ 0.95
SLX4Q8IY92 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC21.01■□□□□ 0.95
SLX4Q8IY92 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLX4Q8IY92 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLX4Q8IY92 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
SLX4Q8IY92 STK4-201ENST00000372801 2038 ntTSL 2 BASIC21.01■□□□□ 0.95
SLX4Q8IY92 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLX4Q8IY92 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.01■□□□□ 0.95
SLX4Q8IY92 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLX4Q8IY92 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLX4Q8IY92 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC21.01■□□□□ 0.95
SLX4Q8IY92 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.01■□□□□ 0.95
SLX4Q8IY92 WASH6P-202ENST00000359512 1437 ntBASIC21.01■□□□□ 0.95
SLX4Q8IY92 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SLX4Q8IY92 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
SLX4Q8IY92 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
SLX4Q8IY92 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLX4Q8IY92 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLX4Q8IY92 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLX4Q8IY92 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SLX4Q8IY92 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC21.01■□□□□ 0.95
SLX4Q8IY92 NAA50-208ENST00000497255 789 ntTSL 5 BASIC21.01■□□□□ 0.95
SLX4Q8IY92 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC21.01■□□□□ 0.95
SLX4Q8IY92 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC21.01■□□□□ 0.95
SLX4Q8IY92 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLX4Q8IY92 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLX4Q8IY92 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.01■□□□□ 0.95
SLX4Q8IY92 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.01■□□□□ 0.95
SLX4Q8IY92 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC21.01■□□□□ 0.95
SLX4Q8IY92 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.01■□□□□ 0.95
SLX4Q8IY92 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLX4Q8IY92 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SLX4Q8IY92 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLX4Q8IY92 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC21■□□□□ 0.95
SLX4Q8IY92 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
SLX4Q8IY92 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC21■□□□□ 0.95
SLX4Q8IY92 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SLX4Q8IY92 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SLX4Q8IY92 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLX4Q8IY92 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLX4Q8IY92 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC21■□□□□ 0.95
SLX4Q8IY92 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
SLX4Q8IY92 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLX4Q8IY92 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC21■□□□□ 0.95
SLX4Q8IY92 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC21■□□□□ 0.95
SLX4Q8IY92 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC21■□□□□ 0.95
SLX4Q8IY92 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC21■□□□□ 0.95
SLX4Q8IY92 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC21■□□□□ 0.95
SLX4Q8IY92 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms