Protein–RNA interactions for Protein: Q8IUZ0

LRRC49, Leucine-rich repeat-containing protein 49, humanhuman

Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49Q8IUZ0 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC49Q8IUZ0 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC49Q8IUZ0 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.82■□□□□ 0.44
LRRC49Q8IUZ0 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC49Q8IUZ0 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC49Q8IUZ0 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
LRRC49Q8IUZ0 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC49Q8IUZ0 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.82■□□□□ 0.44
LRRC49Q8IUZ0 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.82■□□□□ 0.44
LRRC49Q8IUZ0 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC49Q8IUZ0 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC49Q8IUZ0 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC49Q8IUZ0 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.82■□□□□ 0.44
LRRC49Q8IUZ0 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.82■□□□□ 0.44
LRRC49Q8IUZ0 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
LRRC49Q8IUZ0 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.82■□□□□ 0.44
LRRC49Q8IUZ0 KRT18P56-201ENST00000507275 550 ntBASIC17.82■□□□□ 0.44
LRRC49Q8IUZ0 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.82■□□□□ 0.44
LRRC49Q8IUZ0 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.82■□□□□ 0.44
LRRC49Q8IUZ0 AC116353.5-201ENST00000638148 1699 ntBASIC17.82■□□□□ 0.44
LRRC49Q8IUZ0 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC49Q8IUZ0 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
LRRC49Q8IUZ0 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC49Q8IUZ0 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC49Q8IUZ0 AC079776.2-201ENST00000641154 1609 ntBASIC17.82■□□□□ 0.44
LRRC49Q8IUZ0 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC49Q8IUZ0 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC49Q8IUZ0 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.82■□□□□ 0.44
LRRC49Q8IUZ0 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC49Q8IUZ0 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC49Q8IUZ0 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
LRRC49Q8IUZ0 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC49Q8IUZ0 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC49Q8IUZ0 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.81■□□□□ 0.44
LRRC49Q8IUZ0 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC49Q8IUZ0 AC141586.5-201ENST00000624546 2050 ntBASIC17.81■□□□□ 0.44
LRRC49Q8IUZ0 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.81■□□□□ 0.44
LRRC49Q8IUZ0 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC49Q8IUZ0 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC49Q8IUZ0 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC49Q8IUZ0 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC49Q8IUZ0 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
LRRC49Q8IUZ0 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC49Q8IUZ0 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.81■□□□□ 0.44
LRRC49Q8IUZ0 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
LRRC49Q8IUZ0 CLEC4GP1-201ENST00000596555 870 ntBASIC17.81■□□□□ 0.44
LRRC49Q8IUZ0 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.81■□□□□ 0.44
LRRC49Q8IUZ0 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.81■□□□□ 0.44
LRRC49Q8IUZ0 PP12613-201ENST00000424958 2230 ntBASIC17.81■□□□□ 0.44
LRRC49Q8IUZ0 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
LRRC49Q8IUZ0 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC49Q8IUZ0 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC49Q8IUZ0 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC49Q8IUZ0 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC49Q8IUZ0 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC49Q8IUZ0 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC49Q8IUZ0 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC49Q8IUZ0 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC49Q8IUZ0 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC49Q8IUZ0 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC49Q8IUZ0 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
LRRC49Q8IUZ0 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
LRRC49Q8IUZ0 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC49Q8IUZ0 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC49Q8IUZ0 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC49Q8IUZ0 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC49Q8IUZ0 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC49Q8IUZ0 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC49Q8IUZ0 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC49Q8IUZ0 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.8■□□□□ 0.44
LRRC49Q8IUZ0 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.8■□□□□ 0.44
LRRC49Q8IUZ0 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC49Q8IUZ0 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC49Q8IUZ0 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC49Q8IUZ0 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC49Q8IUZ0 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC49Q8IUZ0 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.8■□□□□ 0.44
LRRC49Q8IUZ0 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
LRRC49Q8IUZ0 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.8■□□□□ 0.44
LRRC49Q8IUZ0 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
LRRC49Q8IUZ0 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC49Q8IUZ0 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.8■□□□□ 0.44
LRRC49Q8IUZ0 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC49Q8IUZ0 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.8■□□□□ 0.44
LRRC49Q8IUZ0 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC49Q8IUZ0 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.8■□□□□ 0.44
LRRC49Q8IUZ0 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC49Q8IUZ0 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC49Q8IUZ0 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC49Q8IUZ0 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC49Q8IUZ0 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC49Q8IUZ0 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC49Q8IUZ0 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC49Q8IUZ0 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.79■□□□□ 0.44
LRRC49Q8IUZ0 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC49Q8IUZ0 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.79■□□□□ 0.44
LRRC49Q8IUZ0 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.79■□□□□ 0.44
LRRC49Q8IUZ0 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.79■□□□□ 0.44
LRRC49Q8IUZ0 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.79■□□□□ 0.44
LRRC49Q8IUZ0 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms