Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 AQP6-203ENST00000551733 849 ntTSL 3 BASIC25.79■■□□□ 1.72
CCDC141Q6ZP82 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC25.79■■□□□ 1.72
CCDC141Q6ZP82 MIR4515-201ENST00000584082 81 ntBASIC25.79■■□□□ 1.72
CCDC141Q6ZP82 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
CCDC141Q6ZP82 PKD1P6-201ENST00000343738 4769 ntBASIC25.78■■□□□ 1.72
CCDC141Q6ZP82 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC25.78■■□□□ 1.72
CCDC141Q6ZP82 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
CCDC141Q6ZP82 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC25.78■■□□□ 1.72
CCDC141Q6ZP82 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
CCDC141Q6ZP82 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
CCDC141Q6ZP82 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC25.78■■□□□ 1.72
CCDC141Q6ZP82 PTMS-202ENST00000389462 773 ntTSL 2 BASIC25.78■■□□□ 1.72
CCDC141Q6ZP82 HLA-DRB6-201ENST00000411500 1235 ntBASIC25.78■■□□□ 1.72
CCDC141Q6ZP82 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC25.78■■□□□ 1.72
CCDC141Q6ZP82 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC25.78■■□□□ 1.72
CCDC141Q6ZP82 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC25.78■■□□□ 1.72
CCDC141Q6ZP82 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC25.78■■□□□ 1.72
CCDC141Q6ZP82 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC25.78■■□□□ 1.72
CCDC141Q6ZP82 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC25.78■■□□□ 1.72
CCDC141Q6ZP82 CD7-202ENST00000578509 925 ntTSL 3 BASIC25.78■■□□□ 1.72
CCDC141Q6ZP82 AJ011932.1-201ENST00000621707 465 ntBASIC25.78■■□□□ 1.72
CCDC141Q6ZP82 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CCDC141Q6ZP82 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC25.78■■□□□ 1.72
CCDC141Q6ZP82 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC141Q6ZP82 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC141Q6ZP82 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
CCDC141Q6ZP82 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC25.77■■□□□ 1.72
CCDC141Q6ZP82 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC25.77■■□□□ 1.72
CCDC141Q6ZP82 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC25.77■■□□□ 1.72
CCDC141Q6ZP82 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
CCDC141Q6ZP82 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC25.77■■□□□ 1.72
CCDC141Q6ZP82 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
CCDC141Q6ZP82 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC25.77■■□□□ 1.72
CCDC141Q6ZP82 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
CCDC141Q6ZP82 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC25.77■■□□□ 1.72
CCDC141Q6ZP82 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC141Q6ZP82 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC141Q6ZP82 AL671277.1-201ENST00000429656 993 ntBASIC25.77■■□□□ 1.72
CCDC141Q6ZP82 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC25.77■■□□□ 1.72
CCDC141Q6ZP82 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
CCDC141Q6ZP82 AL512356.2-201ENST00000546955 174 ntBASIC25.77■■□□□ 1.72
CCDC141Q6ZP82 AL009183.1-201ENST00000603760 355 ntBASIC25.77■■□□□ 1.72
CCDC141Q6ZP82 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC141Q6ZP82 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC141Q6ZP82 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC25.77■■□□□ 1.72
CCDC141Q6ZP82 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC25.77■■□□□ 1.72
CCDC141Q6ZP82 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC25.76■■□□□ 1.71
CCDC141Q6ZP82 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC25.76■■□□□ 1.71
CCDC141Q6ZP82 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.71
CCDC141Q6ZP82 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CCDC141Q6ZP82 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CCDC141Q6ZP82 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC25.76■■□□□ 1.71
CCDC141Q6ZP82 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC25.76■■□□□ 1.71
CCDC141Q6ZP82 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
CCDC141Q6ZP82 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CCDC141Q6ZP82 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
CCDC141Q6ZP82 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CCDC141Q6ZP82 HMGA1P7-201ENST00000406908 502 ntBASIC25.76■■□□□ 1.71
CCDC141Q6ZP82 SPCS2P4-201ENST00000436160 681 ntBASIC25.76■■□□□ 1.71
CCDC141Q6ZP82 COX20P2-201ENST00000452636 358 ntBASIC25.76■■□□□ 1.71
CCDC141Q6ZP82 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC25.76■■□□□ 1.71
CCDC141Q6ZP82 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC25.76■■□□□ 1.71
CCDC141Q6ZP82 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC25.76■■□□□ 1.71
CCDC141Q6ZP82 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC25.76■■□□□ 1.71
CCDC141Q6ZP82 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC25.76■■□□□ 1.71
CCDC141Q6ZP82 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CCDC141Q6ZP82 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC25.76■■□□□ 1.71
CCDC141Q6ZP82 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CCDC141Q6ZP82 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC25.76■■□□□ 1.71
CCDC141Q6ZP82 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CCDC141Q6ZP82 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CCDC141Q6ZP82 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC25.75■■□□□ 1.71
CCDC141Q6ZP82 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
CCDC141Q6ZP82 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC25.75■■□□□ 1.71
CCDC141Q6ZP82 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC25.75■■□□□ 1.71
CCDC141Q6ZP82 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
CCDC141Q6ZP82 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CCDC141Q6ZP82 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC25.75■■□□□ 1.71
CCDC141Q6ZP82 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC25.75■■□□□ 1.71
CCDC141Q6ZP82 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC25.75■■□□□ 1.71
CCDC141Q6ZP82 AL592309.1-201ENST00000443127 649 ntBASIC25.75■■□□□ 1.71
CCDC141Q6ZP82 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC25.75■■□□□ 1.71
CCDC141Q6ZP82 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CCDC141Q6ZP82 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC25.75■■□□□ 1.71
CCDC141Q6ZP82 AC109635.5-201ENST00000533593 962 ntBASIC25.75■■□□□ 1.71
CCDC141Q6ZP82 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC25.75■■□□□ 1.71
CCDC141Q6ZP82 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
CCDC141Q6ZP82 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC25.75■■□□□ 1.71
CCDC141Q6ZP82 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC25.74■■□□□ 1.71
CCDC141Q6ZP82 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC25.74■■□□□ 1.71
CCDC141Q6ZP82 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC25.74■■□□□ 1.71
CCDC141Q6ZP82 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CCDC141Q6ZP82 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CCDC141Q6ZP82 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC25.74■■□□□ 1.71
CCDC141Q6ZP82 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC25.74■■□□□ 1.71
CCDC141Q6ZP82 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC25.74■■□□□ 1.71
CCDC141Q6ZP82 INO80C-206ENST00000586489 594 ntTSL 3 BASIC25.74■■□□□ 1.71
CCDC141Q6ZP82 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CCDC141Q6ZP82 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
CCDC141Q6ZP82 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC25.74■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms