Protein–RNA interactions for Protein: Q12986

NFX1, Transcriptional repressor NF-X1, humanhuman

Known RBP Predictions only

Length 1,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1Q12986 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
NFX1Q12986 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.19■□□□□ 0.66
NFX1Q12986 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
NFX1Q12986 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
NFX1Q12986 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NFX1Q12986 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
NFX1Q12986 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
NFX1Q12986 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NFX1Q12986 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
NFX1Q12986 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
NFX1Q12986 RPSAP43-201ENST00000402237 625 ntBASIC19.19■□□□□ 0.66
NFX1Q12986 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
NFX1Q12986 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.19■□□□□ 0.66
NFX1Q12986 ELK2BP-201ENST00000415014 1224 ntBASIC19.19■□□□□ 0.66
NFX1Q12986 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.19■□□□□ 0.66
NFX1Q12986 AC092183.1-201ENST00000469884 875 ntBASIC19.19■□□□□ 0.66
NFX1Q12986 AC112482.1-201ENST00000492080 688 ntBASIC19.19■□□□□ 0.66
NFX1Q12986 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.19■□□□□ 0.66
NFX1Q12986 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.19■□□□□ 0.66
NFX1Q12986 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NFX1Q12986 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NFX1Q12986 AC067852.2-201ENST00000590513 2313 ntBASIC19.19■□□□□ 0.66
NFX1Q12986 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NFX1Q12986 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NFX1Q12986 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
NFX1Q12986 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
NFX1Q12986 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NFX1Q12986 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NFX1Q12986 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.19■□□□□ 0.66
NFX1Q12986 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.18■□□□□ 0.66
NFX1Q12986 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NFX1Q12986 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
NFX1Q12986 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
NFX1Q12986 NCF1C-201ENST00000438382 1427 ntBASIC19.18■□□□□ 0.66
NFX1Q12986 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.18■□□□□ 0.66
NFX1Q12986 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.18■□□□□ 0.66
NFX1Q12986 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.18■□□□□ 0.66
NFX1Q12986 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NFX1Q12986 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.18■□□□□ 0.66
NFX1Q12986 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NFX1Q12986 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.18■□□□□ 0.66
NFX1Q12986 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
NFX1Q12986 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.18■□□□□ 0.66
NFX1Q12986 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.18■□□□□ 0.66
NFX1Q12986 GPX1P2-201ENST00000429271 606 ntBASIC19.18■□□□□ 0.66
NFX1Q12986 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
NFX1Q12986 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.18■□□□□ 0.66
NFX1Q12986 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.18■□□□□ 0.66
NFX1Q12986 STK19B-204ENST00000512515 211 ntBASIC19.18■□□□□ 0.66
NFX1Q12986 IGHV3-52-201ENST00000519770 353 ntBASIC19.18■□□□□ 0.66
NFX1Q12986 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.18■□□□□ 0.66
NFX1Q12986 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.18■□□□□ 0.66
NFX1Q12986 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.18■□□□□ 0.66
NFX1Q12986 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.18■□□□□ 0.66
NFX1Q12986 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NFX1Q12986 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
NFX1Q12986 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NFX1Q12986 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
NFX1Q12986 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NFX1Q12986 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NFX1Q12986 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.18■□□□□ 0.66
NFX1Q12986 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NFX1Q12986 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
NFX1Q12986 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NFX1Q12986 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.18■□□□□ 0.66
NFX1Q12986 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.18■□□□□ 0.66
NFX1Q12986 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NFX1Q12986 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.17■□□□□ 0.66
NFX1Q12986 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NFX1Q12986 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NFX1Q12986 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NFX1Q12986 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.17■□□□□ 0.66
NFX1Q12986 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NFX1Q12986 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.17■□□□□ 0.66
NFX1Q12986 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
NFX1Q12986 AC138028.4-201ENST00000564984 1845 ntBASIC19.17■□□□□ 0.66
NFX1Q12986 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NFX1Q12986 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NFX1Q12986 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
NFX1Q12986 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.17■□□□□ 0.66
NFX1Q12986 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.17■□□□□ 0.66
NFX1Q12986 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
NFX1Q12986 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.17■□□□□ 0.66
NFX1Q12986 DDX43P3-201ENST00000441064 443 ntBASIC19.17■□□□□ 0.66
NFX1Q12986 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.17■□□□□ 0.66
NFX1Q12986 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.17■□□□□ 0.66
NFX1Q12986 DNAJB3-201ENST00000446806 729 ntBASIC19.17■□□□□ 0.66
NFX1Q12986 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.17■□□□□ 0.66
NFX1Q12986 AC002347.1-201ENST00000569543 541 ntBASIC19.17■□□□□ 0.66
NFX1Q12986 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.17■□□□□ 0.66
NFX1Q12986 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.17■□□□□ 0.66
NFX1Q12986 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.17■□□□□ 0.66
NFX1Q12986 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NFX1Q12986 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NFX1Q12986 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NFX1Q12986 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.17■□□□□ 0.66
NFX1Q12986 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NFX1Q12986 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.17■□□□□ 0.66
NFX1Q12986 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NFX1Q12986 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms