Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH4P55283 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.84■□□□□ 0.45
CDH4P55283 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.84■□□□□ 0.45
CDH4P55283 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH4P55283 AC079776.4-201ENST00000511039 504 ntBASIC17.84■□□□□ 0.45
CDH4P55283 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.84■□□□□ 0.45
CDH4P55283 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.84■□□□□ 0.45
CDH4P55283 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.84■□□□□ 0.45
CDH4P55283 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.84■□□□□ 0.45
CDH4P55283 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.84■□□□□ 0.45
CDH4P55283 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.84■□□□□ 0.45
CDH4P55283 AL049840.3-201ENST00000602669 611 ntBASIC17.84■□□□□ 0.45
CDH4P55283 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.84■□□□□ 0.45
CDH4P55283 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.84■□□□□ 0.45
CDH4P55283 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
CDH4P55283 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
CDH4P55283 AC004706.3-202ENST00000621574 984 ntBASIC17.84■□□□□ 0.45
CDH4P55283 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CDH4P55283 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CDH4P55283 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CDH4P55283 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH4P55283 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH4P55283 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
CDH4P55283 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH4P55283 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
CDH4P55283 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH4P55283 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH4P55283 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.84■□□□□ 0.45
CDH4P55283 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH4P55283 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH4P55283 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH4P55283 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDH4P55283 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CDH4P55283 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
CDH4P55283 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDH4P55283 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CDH4P55283 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CDH4P55283 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDH4P55283 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH4P55283 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CDH4P55283 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.83■□□□□ 0.44
CDH4P55283 LINC00982-205ENST00000420957 435 ntBASIC17.83■□□□□ 0.44
CDH4P55283 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.83■□□□□ 0.44
CDH4P55283 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
CDH4P55283 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.83■□□□□ 0.44
CDH4P55283 AC105339.3-201ENST00000560043 636 ntBASIC17.83■□□□□ 0.44
CDH4P55283 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.83■□□□□ 0.44
CDH4P55283 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.83■□□□□ 0.44
CDH4P55283 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH4P55283 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.83■□□□□ 0.44
CDH4P55283 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.83■□□□□ 0.44
CDH4P55283 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDH4P55283 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH4P55283 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH4P55283 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDH4P55283 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDH4P55283 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH4P55283 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH4P55283 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDH4P55283 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
CDH4P55283 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH4P55283 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH4P55283 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH4P55283 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH4P55283 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH4P55283 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.82■□□□□ 0.44
CDH4P55283 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CDH4P55283 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CDH4P55283 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
CDH4P55283 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH4P55283 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CDH4P55283 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.82■□□□□ 0.44
CDH4P55283 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH4P55283 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.82■□□□□ 0.44
CDH4P55283 AC012640.2-201ENST00000561606 901 ntBASIC17.82■□□□□ 0.44
CDH4P55283 AL139424.1-201ENST00000607572 797 ntBASIC17.82■□□□□ 0.44
CDH4P55283 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.82■□□□□ 0.44
CDH4P55283 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.82■□□□□ 0.44
CDH4P55283 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH4P55283 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CDH4P55283 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH4P55283 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH4P55283 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH4P55283 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.82■□□□□ 0.44
CDH4P55283 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH4P55283 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH4P55283 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CDH4P55283 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.81■□□□□ 0.44
CDH4P55283 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.81■□□□□ 0.44
CDH4P55283 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH4P55283 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH4P55283 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.81■□□□□ 0.44
CDH4P55283 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDH4P55283 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH4P55283 KRT18P27-201ENST00000427733 1299 ntBASIC17.81■□□□□ 0.44
CDH4P55283 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.81■□□□□ 0.44
CDH4P55283 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.81■□□□□ 0.44
CDH4P55283 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDH4P55283 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.81■□□□□ 0.44
CDH4P55283 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms