Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC25A1P53007 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.53■□□□□ 0.08
SLC25A1P53007 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SLC25A1P53007 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC25A1P53007 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
SLC25A1P53007 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC25A1P53007 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SLC25A1P53007 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC25A1P53007 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC25A1P53007 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC25A1P53007 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC25A1P53007 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC25A1P53007 AC105020.1-201ENST00000435356 2205 ntBASIC15.52■□□□□ 0.08
SLC25A1P53007 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC25A1P53007 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
SLC25A1P53007 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC25A1P53007 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.52■□□□□ 0.08
SLC25A1P53007 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SLC25A1P53007 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
SLC25A1P53007 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
SLC25A1P53007 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.52■□□□□ 0.08
SLC25A1P53007 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC25A1P53007 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
SLC25A1P53007 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC25A1P53007 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC25A1P53007 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC25A1P53007 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.52■□□□□ 0.08
SLC25A1P53007 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SLC25A1P53007 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC25A1P53007 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC25A1P53007 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.52■□□□□ 0.08
SLC25A1P53007 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.52■□□□□ 0.08
SLC25A1P53007 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC25A1P53007 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.52■□□□□ 0.08
SLC25A1P53007 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC15.52■□□□□ 0.08
SLC25A1P53007 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.52■□□□□ 0.08
SLC25A1P53007 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
SLC25A1P53007 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.52■□□□□ 0.08
SLC25A1P53007 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
SLC25A1P53007 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SLC25A1P53007 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
SLC25A1P53007 AL049757.1-201ENST00000616842 1596 ntBASIC15.52■□□□□ 0.07
SLC25A1P53007 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SLC25A1P53007 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.52■□□□□ 0.07
SLC25A1P53007 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
SLC25A1P53007 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
SLC25A1P53007 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
SLC25A1P53007 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
SLC25A1P53007 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SLC25A1P53007 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SLC25A1P53007 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
SLC25A1P53007 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SLC25A1P53007 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
SLC25A1P53007 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SLC25A1P53007 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.51■□□□□ 0.07
SLC25A1P53007 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
SLC25A1P53007 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.51■□□□□ 0.07
SLC25A1P53007 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC25A1P53007 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC25A1P53007 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SLC25A1P53007 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC25A1P53007 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SLC25A1P53007 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC25A1P53007 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC25A1P53007 FAM220CP-201ENST00000395253 831 ntBASIC15.51■□□□□ 0.07
SLC25A1P53007 AL645929.1-201ENST00000420084 975 ntBASIC15.51■□□□□ 0.07
SLC25A1P53007 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.51■□□□□ 0.07
SLC25A1P53007 TSPY22P-201ENST00000427496 604 ntBASIC15.51■□□□□ 0.07
SLC25A1P53007 AL671277.2-201ENST00000458060 996 ntBASIC15.51■□□□□ 0.07
SLC25A1P53007 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.51■□□□□ 0.07
SLC25A1P53007 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.51■□□□□ 0.07
SLC25A1P53007 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
SLC25A1P53007 AC090616.6-201ENST00000582640 721 ntBASIC15.51■□□□□ 0.07
SLC25A1P53007 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.51■□□□□ 0.07
SLC25A1P53007 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.51■□□□□ 0.07
SLC25A1P53007 AL592071.1-201ENST00000611956 408 ntBASIC15.51■□□□□ 0.07
SLC25A1P53007 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.51■□□□□ 0.07
SLC25A1P53007 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.51■□□□□ 0.07
SLC25A1P53007 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
SLC25A1P53007 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.51■□□□□ 0.07
SLC25A1P53007 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC25A1P53007 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.51■□□□□ 0.07
SLC25A1P53007 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SLC25A1P53007 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SLC25A1P53007 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
SLC25A1P53007 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.51■□□□□ 0.07
SLC25A1P53007 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC25A1P53007 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC25A1P53007 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.51■□□□□ 0.07
SLC25A1P53007 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.51■□□□□ 0.07
SLC25A1P53007 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.51■□□□□ 0.07
SLC25A1P53007 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SLC25A1P53007 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC25A1P53007 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC25A1P53007 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.5■□□□□ 0.07
SLC25A1P53007 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC25A1P53007 AC005915.1-201ENST00000624912 2018 ntBASIC15.5■□□□□ 0.07
SLC25A1P53007 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC25A1P53007 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SLC25A1P53007 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms