Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 BX005266.1-201ENST00000473402 457 ntBASIC17.14■□□□□ 0.33
CLCNKAP51800 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.14■□□□□ 0.33
CLCNKAP51800 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.14■□□□□ 0.33
CLCNKAP51800 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.14■□□□□ 0.33
CLCNKAP51800 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.14■□□□□ 0.33
CLCNKAP51800 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.14■□□□□ 0.33
CLCNKAP51800 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.14■□□□□ 0.33
CLCNKAP51800 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.14■□□□□ 0.33
CLCNKAP51800 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CLCNKAP51800 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.14■□□□□ 0.33
CLCNKAP51800 AC134043.2-201ENST00000624206 2238 ntBASIC17.14■□□□□ 0.33
CLCNKAP51800 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.14■□□□□ 0.33
CLCNKAP51800 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCNKAP51800 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CLCNKAP51800 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCNKAP51800 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCNKAP51800 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CLCNKAP51800 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCNKAP51800 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCNKAP51800 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.13■□□□□ 0.33
CLCNKAP51800 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLCNKAP51800 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CLCNKAP51800 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCNKAP51800 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CLCNKAP51800 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.13■□□□□ 0.33
CLCNKAP51800 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLCNKAP51800 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLCNKAP51800 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
CLCNKAP51800 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CLCNKAP51800 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CLCNKAP51800 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCNKAP51800 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CLCNKAP51800 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCNKAP51800 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.13■□□□□ 0.33
CLCNKAP51800 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CLCNKAP51800 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCNKAP51800 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CLCNKAP51800 RPS2P1-201ENST00000434010 821 ntBASIC17.13■□□□□ 0.33
CLCNKAP51800 STK19B-204ENST00000512515 211 ntBASIC17.13■□□□□ 0.33
CLCNKAP51800 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.13■□□□□ 0.33
CLCNKAP51800 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.13■□□□□ 0.33
CLCNKAP51800 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CLCNKAP51800 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.13■□□□□ 0.33
CLCNKAP51800 AC139887.3-201ENST00000568585 713 ntBASIC17.13■□□□□ 0.33
CLCNKAP51800 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.13■□□□□ 0.33
CLCNKAP51800 AC004817.3-201ENST00000602957 2129 ntBASIC17.13■□□□□ 0.33
CLCNKAP51800 MIR7706-201ENST00000613747 67 ntBASIC17.13■□□□□ 0.33
CLCNKAP51800 AL589182.2-201ENST00000619332 1049 ntBASIC17.13■□□□□ 0.33
CLCNKAP51800 AC008735.5-201ENST00000623544 497 ntBASIC17.13■□□□□ 0.33
CLCNKAP51800 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCNKAP51800 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
CLCNKAP51800 AC009336.1-201ENST00000608941 1553 ntBASIC17.13■□□□□ 0.33
CLCNKAP51800 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CLCNKAP51800 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.13■□□□□ 0.33
CLCNKAP51800 AL133373.2-201ENST00000623187 2828 ntBASIC17.13■□□□□ 0.33
CLCNKAP51800 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCNKAP51800 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLCNKAP51800 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCNKAP51800 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CLCNKAP51800 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CLCNKAP51800 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCNKAP51800 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCNKAP51800 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCNKAP51800 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLCNKAP51800 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CLCNKAP51800 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCNKAP51800 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCNKAP51800 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLCNKAP51800 LINC00304-203ENST00000565008 1864 ntBASIC17.12■□□□□ 0.33
CLCNKAP51800 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLCNKAP51800 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCNKAP51800 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CLCNKAP51800 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CLCNKAP51800 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLCNKAP51800 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.12■□□□□ 0.33
CLCNKAP51800 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.12■□□□□ 0.33
CLCNKAP51800 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CLCNKAP51800 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CLCNKAP51800 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CLCNKAP51800 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.12■□□□□ 0.33
CLCNKAP51800 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CLCNKAP51800 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLCNKAP51800 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLCNKAP51800 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.12■□□□□ 0.33
CLCNKAP51800 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.12■□□□□ 0.33
CLCNKAP51800 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.12■□□□□ 0.33
CLCNKAP51800 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCNKAP51800 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCNKAP51800 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCNKAP51800 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCNKAP51800 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCNKAP51800 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLCNKAP51800 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCNKAP51800 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CLCNKAP51800 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCNKAP51800 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCNKAP51800 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCNKAP51800 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCNKAP51800 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCNKAP51800 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms