Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.28■□□□□ 0.68
GPC3P51654 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GPC3P51654 TERC-201ENST00000602385 541 ntBASIC19.28■□□□□ 0.68
GPC3P51654 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GPC3P51654 AC004706.3-202ENST00000621574 984 ntBASIC19.28■□□□□ 0.68
GPC3P51654 HTR7P1-202ENST00000624664 4411 ntBASIC19.28■□□□□ 0.68
GPC3P51654 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
GPC3P51654 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.28■□□□□ 0.68
GPC3P51654 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GPC3P51654 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
GPC3P51654 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GPC3P51654 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.27■□□□□ 0.68
GPC3P51654 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.27■□□□□ 0.68
GPC3P51654 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.27■□□□□ 0.68
GPC3P51654 PCDHB18P-201ENST00000524813 2368 ntBASIC19.27■□□□□ 0.68
GPC3P51654 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.27■□□□□ 0.68
GPC3P51654 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
GPC3P51654 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GPC3P51654 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
GPC3P51654 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
GPC3P51654 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GPC3P51654 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GPC3P51654 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.27■□□□□ 0.68
GPC3P51654 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.27■□□□□ 0.68
GPC3P51654 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.27■□□□□ 0.68
GPC3P51654 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.27■□□□□ 0.68
GPC3P51654 MIR1199-201ENST00000621445 119 ntBASIC19.27■□□□□ 0.68
GPC3P51654 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.27■□□□□ 0.68
GPC3P51654 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
GPC3P51654 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
GPC3P51654 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.27■□□□□ 0.68
GPC3P51654 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GPC3P51654 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
GPC3P51654 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GPC3P51654 AC005332.8-201ENST00000622750 2735 ntBASIC19.27■□□□□ 0.67
GPC3P51654 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GPC3P51654 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
GPC3P51654 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
GPC3P51654 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GPC3P51654 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GPC3P51654 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
GPC3P51654 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
GPC3P51654 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.26■□□□□ 0.67
GPC3P51654 PMS2P7-201ENST00000506558 1336 ntBASIC19.26■□□□□ 0.67
GPC3P51654 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.26■□□□□ 0.67
GPC3P51654 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.26■□□□□ 0.67
GPC3P51654 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.26■□□□□ 0.67
GPC3P51654 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GPC3P51654 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
GPC3P51654 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GPC3P51654 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GPC3P51654 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GPC3P51654 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.26■□□□□ 0.67
GPC3P51654 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.26■□□□□ 0.67
GPC3P51654 AC005104.2-201ENST00000427818 678 ntBASIC19.26■□□□□ 0.67
GPC3P51654 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
GPC3P51654 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.26■□□□□ 0.67
GPC3P51654 AC136632.2-201ENST00000512891 861 ntBASIC19.26■□□□□ 0.67
GPC3P51654 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.26■□□□□ 0.67
GPC3P51654 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.26■□□□□ 0.67
GPC3P51654 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.26■□□□□ 0.67
GPC3P51654 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.26■□□□□ 0.67
GPC3P51654 AC140113.2-201ENST00000604370 208 ntBASIC19.26■□□□□ 0.67
GPC3P51654 AC027601.4-201ENST00000611259 610 ntBASIC19.26■□□□□ 0.67
GPC3P51654 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
GPC3P51654 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
GPC3P51654 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GPC3P51654 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GPC3P51654 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.26■□□□□ 0.67
GPC3P51654 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
GPC3P51654 AC009336.1-201ENST00000608941 1553 ntBASIC19.26■□□□□ 0.67
GPC3P51654 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
GPC3P51654 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GPC3P51654 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
GPC3P51654 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.26■□□□□ 0.67
GPC3P51654 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GPC3P51654 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
GPC3P51654 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GPC3P51654 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.26■□□□□ 0.67
GPC3P51654 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
GPC3P51654 NCF1C-201ENST00000438382 1427 ntBASIC19.25■□□□□ 0.67
GPC3P51654 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GPC3P51654 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.25■□□□□ 0.67
GPC3P51654 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
GPC3P51654 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GPC3P51654 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GPC3P51654 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GPC3P51654 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
GPC3P51654 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GPC3P51654 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GPC3P51654 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.25■□□□□ 0.67
GPC3P51654 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GPC3P51654 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
GPC3P51654 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.25■□□□□ 0.67
GPC3P51654 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GPC3P51654 AC009947.1-201ENST00000444350 727 ntBASIC19.25■□□□□ 0.67
GPC3P51654 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GPC3P51654 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.25■□□□□ 0.67
GPC3P51654 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.25■□□□□ 0.67
GPC3P51654 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms