Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.25■□□□□ 0.67
CPT1AP50416 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CPT1AP50416 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CPT1AP50416 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CPT1AP50416 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CPT1AP50416 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.25■□□□□ 0.67
CPT1AP50416 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPT1AP50416 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPT1AP50416 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPT1AP50416 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPT1AP50416 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPT1AP50416 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.24■□□□□ 0.67
CPT1AP50416 HCG11-201ENST00000411553 5696 ntBASIC19.24■□□□□ 0.67
CPT1AP50416 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPT1AP50416 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.24■□□□□ 0.67
CPT1AP50416 AC004461.1-201ENST00000412461 403 ntBASIC19.24■□□□□ 0.67
CPT1AP50416 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.24■□□□□ 0.67
CPT1AP50416 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPT1AP50416 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.24■□□□□ 0.67
CPT1AP50416 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.24■□□□□ 0.67
CPT1AP50416 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.24■□□□□ 0.67
CPT1AP50416 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.24■□□□□ 0.67
CPT1AP50416 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.24■□□□□ 0.67
CPT1AP50416 LINC01451-201ENST00000623792 534 ntBASIC19.24■□□□□ 0.67
CPT1AP50416 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.24■□□□□ 0.67
CPT1AP50416 AL121761.2-201ENST00000598007 1648 ntBASIC19.24■□□□□ 0.67
CPT1AP50416 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CPT1AP50416 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CPT1AP50416 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CPT1AP50416 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPT1AP50416 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.24■□□□□ 0.67
CPT1AP50416 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.24■□□□□ 0.67
CPT1AP50416 AC006116.8-202ENST00000587620 1550 ntBASIC19.23■□□□□ 0.67
CPT1AP50416 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CPT1AP50416 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPT1AP50416 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
CPT1AP50416 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.23■□□□□ 0.67
CPT1AP50416 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPT1AP50416 MIR770-201ENST00000390219 98 ntBASIC19.23■□□□□ 0.67
CPT1AP50416 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.23■□□□□ 0.67
CPT1AP50416 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.23■□□□□ 0.67
CPT1AP50416 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.23■□□□□ 0.67
CPT1AP50416 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.23■□□□□ 0.67
CPT1AP50416 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.23■□□□□ 0.67
CPT1AP50416 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.23■□□□□ 0.67
CPT1AP50416 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CPT1AP50416 AC087163.2-201ENST00000457299 853 ntBASIC19.23■□□□□ 0.67
CPT1AP50416 SLC25A6P2-201ENST00000497974 877 ntBASIC19.23■□□□□ 0.67
CPT1AP50416 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CPT1AP50416 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.23■□□□□ 0.67
CPT1AP50416 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CPT1AP50416 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.23■□□□□ 0.67
CPT1AP50416 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPT1AP50416 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CPT1AP50416 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.23■□□□□ 0.67
CPT1AP50416 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.23■□□□□ 0.67
CPT1AP50416 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CPT1AP50416 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.23■□□□□ 0.67
CPT1AP50416 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPT1AP50416 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.23■□□□□ 0.67
CPT1AP50416 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CPT1AP50416 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPT1AP50416 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPT1AP50416 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CPT1AP50416 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPT1AP50416 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CPT1AP50416 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CPT1AP50416 AC092919.2-201ENST00000623631 1645 ntBASIC19.22■□□□□ 0.67
CPT1AP50416 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPT1AP50416 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
CPT1AP50416 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CPT1AP50416 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPT1AP50416 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPT1AP50416 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.22■□□□□ 0.67
CPT1AP50416 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPT1AP50416 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CPT1AP50416 AL139400.1-201ENST00000366220 510 ntBASIC19.22■□□□□ 0.67
CPT1AP50416 AC002056.1-201ENST00000395613 760 ntBASIC19.22■□□□□ 0.67
CPT1AP50416 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.22■□□□□ 0.67
CPT1AP50416 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.22■□□□□ 0.67
CPT1AP50416 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.22■□□□□ 0.67
CPT1AP50416 AC004449.1-201ENST00000564240 433 ntBASIC19.22■□□□□ 0.67
CPT1AP50416 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPT1AP50416 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.22■□□□□ 0.67
CPT1AP50416 AC011467.4-201ENST00000594891 528 ntBASIC19.22■□□□□ 0.67
CPT1AP50416 AC022145.2-201ENST00000598203 171 ntBASIC19.22■□□□□ 0.67
CPT1AP50416 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.22■□□□□ 0.67
CPT1AP50416 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPT1AP50416 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CPT1AP50416 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.22■□□□□ 0.67
CPT1AP50416 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPT1AP50416 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CPT1AP50416 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.22■□□□□ 0.67
CPT1AP50416 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CPT1AP50416 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPT1AP50416 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPT1AP50416 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CPT1AP50416 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.22■□□□□ 0.67
CPT1AP50416 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.22■□□□□ 0.67
CPT1AP50416 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms