Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CEACAM3P40198 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CEACAM3P40198 INTS4P1-201ENST00000438455 1935 ntBASIC14.29□□□□□ -0.12
CEACAM3P40198 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CEACAM3P40198 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CEACAM3P40198 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CEACAM3P40198 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC14.29□□□□□ -0.12
CEACAM3P40198 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CEACAM3P40198 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC14.29□□□□□ -0.12
CEACAM3P40198 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC14.28□□□□□ -0.12
CEACAM3P40198 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CEACAM3P40198 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CEACAM3P40198 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CEACAM3P40198 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CEACAM3P40198 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CEACAM3P40198 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CEACAM3P40198 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CEACAM3P40198 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CEACAM3P40198 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CEACAM3P40198 RCN1P2-201ENST00000398357 915 ntBASIC14.28□□□□□ -0.12
CEACAM3P40198 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.28□□□□□ -0.12
CEACAM3P40198 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CEACAM3P40198 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CEACAM3P40198 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.28□□□□□ -0.12
CEACAM3P40198 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.28□□□□□ -0.12
CEACAM3P40198 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CEACAM3P40198 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.28□□□□□ -0.12
CEACAM3P40198 MIR5100-201ENST00000579544 119 ntBASIC14.28□□□□□ -0.12
CEACAM3P40198 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.28□□□□□ -0.12
CEACAM3P40198 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CEACAM3P40198 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CEACAM3P40198 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.28□□□□□ -0.12
CEACAM3P40198 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.28□□□□□ -0.12
CEACAM3P40198 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.28□□□□□ -0.12
CEACAM3P40198 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CEACAM3P40198 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
CEACAM3P40198 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CEACAM3P40198 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CEACAM3P40198 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CEACAM3P40198 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CEACAM3P40198 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14.27□□□□□ -0.12
CEACAM3P40198 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CEACAM3P40198 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CEACAM3P40198 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CEACAM3P40198 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CEACAM3P40198 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
CEACAM3P40198 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CEACAM3P40198 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CEACAM3P40198 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CEACAM3P40198 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CEACAM3P40198 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.27□□□□□ -0.12
CEACAM3P40198 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CEACAM3P40198 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CEACAM3P40198 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CEACAM3P40198 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CEACAM3P40198 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CEACAM3P40198 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CEACAM3P40198 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CEACAM3P40198 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.27□□□□□ -0.13
CEACAM3P40198 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.27□□□□□ -0.13
CEACAM3P40198 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.27□□□□□ -0.13
CEACAM3P40198 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CEACAM3P40198 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CEACAM3P40198 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CEACAM3P40198 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC14.27□□□□□ -0.13
CEACAM3P40198 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CEACAM3P40198 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CEACAM3P40198 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
CEACAM3P40198 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CEACAM3P40198 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CEACAM3P40198 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CEACAM3P40198 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CEACAM3P40198 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CEACAM3P40198 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CEACAM3P40198 CD276-203ENST00000537340 2439 ntTSL 2 BASIC14.26□□□□□ -0.13
CEACAM3P40198 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
CEACAM3P40198 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CEACAM3P40198 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC14.26□□□□□ -0.13
CEACAM3P40198 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CEACAM3P40198 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CEACAM3P40198 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CEACAM3P40198 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC14.26□□□□□ -0.13
CEACAM3P40198 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CEACAM3P40198 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CEACAM3P40198 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.26□□□□□ -0.13
CEACAM3P40198 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC14.26□□□□□ -0.13
CEACAM3P40198 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CEACAM3P40198 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC14.26□□□□□ -0.13
CEACAM3P40198 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CEACAM3P40198 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CEACAM3P40198 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.26□□□□□ -0.13
CEACAM3P40198 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CEACAM3P40198 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CEACAM3P40198 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CEACAM3P40198 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.26□□□□□ -0.13
CEACAM3P40198 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.26□□□□□ -0.13
CEACAM3P40198 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.26□□□□□ -0.13
CEACAM3P40198 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.26□□□□□ -0.13
CEACAM3P40198 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.26□□□□□ -0.13
CEACAM3P40198 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms