Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTGFP29279 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTGFP29279 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.49■□□□□ 0.71
CTGFP29279 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTGFP29279 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTGFP29279 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
CTGFP29279 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.49■□□□□ 0.71
CTGFP29279 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTGFP29279 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTGFP29279 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CTGFP29279 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CTGFP29279 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTGFP29279 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTGFP29279 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CTGFP29279 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.49■□□□□ 0.71
CTGFP29279 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CTGFP29279 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTGFP29279 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTGFP29279 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.49■□□□□ 0.71
CTGFP29279 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.49■□□□□ 0.71
CTGFP29279 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CTGFP29279 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC19.49■□□□□ 0.71
CTGFP29279 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC19.49■□□□□ 0.71
CTGFP29279 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CTGFP29279 RN7SL692P-201ENST00000464677 288 ntBASIC19.49■□□□□ 0.71
CTGFP29279 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CTGFP29279 NAA50-208ENST00000497255 789 ntTSL 5 BASIC19.49■□□□□ 0.71
CTGFP29279 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CTGFP29279 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC19.49■□□□□ 0.71
CTGFP29279 AL009183.1-201ENST00000603760 355 ntBASIC19.49■□□□□ 0.71
CTGFP29279 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CTGFP29279 AL161645.1-201ENST00000622716 1255 ntBASIC19.49■□□□□ 0.71
CTGFP29279 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CTGFP29279 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTGFP29279 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTGFP29279 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTGFP29279 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTGFP29279 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.49■□□□□ 0.71
CTGFP29279 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTGFP29279 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.49■□□□□ 0.71
CTGFP29279 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.49■□□□□ 0.71
CTGFP29279 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTGFP29279 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTGFP29279 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTGFP29279 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTGFP29279 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTGFP29279 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTGFP29279 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTGFP29279 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTGFP29279 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTGFP29279 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.48■□□□□ 0.71
CTGFP29279 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CTGFP29279 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CTGFP29279 TSSK5P-201ENST00000423978 907 ntBASIC19.48■□□□□ 0.71
CTGFP29279 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.48■□□□□ 0.71
CTGFP29279 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.48■□□□□ 0.71
CTGFP29279 ALG1L8P-201ENST00000533887 760 ntBASIC19.48■□□□□ 0.71
CTGFP29279 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC19.48■□□□□ 0.71
CTGFP29279 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTGFP29279 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTGFP29279 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTGFP29279 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CTGFP29279 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CTGFP29279 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC19.47■□□□□ 0.71
CTGFP29279 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTGFP29279 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTGFP29279 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.47■□□□□ 0.71
CTGFP29279 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.47■□□□□ 0.71
CTGFP29279 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CTGFP29279 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTGFP29279 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTGFP29279 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTGFP29279 PIN1P1-201ENST00000412108 996 ntBASIC19.47■□□□□ 0.71
CTGFP29279 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CTGFP29279 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.47■□□□□ 0.71
CTGFP29279 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.47■□□□□ 0.71
CTGFP29279 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
CTGFP29279 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CTGFP29279 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.47■□□□□ 0.71
CTGFP29279 REXO1L11P-201ENST00000620964 1927 ntBASIC19.47■□□□□ 0.71
CTGFP29279 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTGFP29279 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTGFP29279 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CTGFP29279 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CTGFP29279 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.46■□□□□ 0.71
CTGFP29279 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTGFP29279 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTGFP29279 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC19.46■□□□□ 0.71
CTGFP29279 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.46■□□□□ 0.71
CTGFP29279 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
CTGFP29279 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTGFP29279 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CTGFP29279 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC19.46■□□□□ 0.71
CTGFP29279 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.46■□□□□ 0.71
CTGFP29279 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC19.46■□□□□ 0.71
CTGFP29279 MIR4453-201ENST00000584019 89 ntBASIC19.46■□□□□ 0.71
CTGFP29279 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.46■□□□□ 0.71
CTGFP29279 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTGFP29279 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTGFP29279 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms