Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.06■□□□□ 0
CD40P25942 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CD40P25942 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CD40P25942 MIR940-201ENST00000401276 94 ntBASIC15.06■□□□□ 0
CD40P25942 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.06■□□□□ 0
CD40P25942 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.06■□□□□ 0
CD40P25942 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
CD40P25942 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.06■□□□□ 0
CD40P25942 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.06■□□□□ 0
CD40P25942 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.06■□□□□ 0
CD40P25942 AC034105.1-201ENST00000563488 319 ntBASIC15.06■□□□□ 0
CD40P25942 AL139424.1-201ENST00000607572 797 ntBASIC15.06■□□□□ 0
CD40P25942 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.06■□□□□ 0
CD40P25942 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CD40P25942 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC15.06■□□□□ 0
CD40P25942 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC15.06■□□□□ 0
CD40P25942 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.06■□□□□ 0
CD40P25942 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CD40P25942 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.06■□□□□ 0
CD40P25942 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CD40P25942 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CD40P25942 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.06■□□□□ 0
CD40P25942 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CD40P25942 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC15.06■□□□□ 0
CD40P25942 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
CD40P25942 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
CD40P25942 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.06■□□□□ 0
CD40P25942 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CD40P25942 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CD40P25942 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.05■□□□□ 0
CD40P25942 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CD40P25942 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CD40P25942 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CD40P25942 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CD40P25942 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
CD40P25942 AL390961.4-201ENST00000623958 2535 ntBASIC15.05■□□□□ 0
CD40P25942 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
CD40P25942 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
CD40P25942 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CD40P25942 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.05■□□□□ -0
CD40P25942 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.05■□□□□ -0
CD40P25942 ELK2BP-201ENST00000415014 1224 ntBASIC15.05■□□□□ -0
CD40P25942 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.05■□□□□ -0
CD40P25942 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
CD40P25942 POLD2P1-201ENST00000511220 997 ntBASIC15.05■□□□□ -0
CD40P25942 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.05■□□□□ -0
CD40P25942 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.05■□□□□ -0
CD40P25942 TERC-201ENST00000602385 541 ntBASIC15.05■□□□□ -0
CD40P25942 AC027601.4-201ENST00000611259 610 ntBASIC15.05■□□□□ -0
CD40P25942 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CD40P25942 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.05■□□□□ -0
CD40P25942 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.05■□□□□ -0
CD40P25942 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CD40P25942 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.05■□□□□ -0
CD40P25942 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.05■□□□□ -0
CD40P25942 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
CD40P25942 AC006504.4-201ENST00000592118 1568 ntBASIC15.05■□□□□ -0
CD40P25942 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.05■□□□□ -0
CD40P25942 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.05■□□□□ -0
CD40P25942 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CD40P25942 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CD40P25942 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CD40P25942 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.05■□□□□ -0
CD40P25942 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CD40P25942 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.05■□□□□ -0
CD40P25942 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC15.05■□□□□ -0
CD40P25942 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CD40P25942 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC15.05■□□□□ -0
CD40P25942 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC15.05■□□□□ -0
CD40P25942 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC15.05■□□□□ -0
CD40P25942 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CD40P25942 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
CD40P25942 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CD40P25942 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CD40P25942 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CD40P25942 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CD40P25942 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
CD40P25942 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.04■□□□□ -0
CD40P25942 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.04■□□□□ -0
CD40P25942 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CD40P25942 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
CD40P25942 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.04■□□□□ -0
CD40P25942 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.04■□□□□ -0
CD40P25942 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.04■□□□□ -0
CD40P25942 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CD40P25942 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
CD40P25942 AC006116.8-202ENST00000587620 1550 ntBASIC15.04■□□□□ -0
CD40P25942 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.04■□□□□ -0
CD40P25942 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
CD40P25942 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.04■□□□□ -0
CD40P25942 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CD40P25942 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.04■□□□□ -0
CD40P25942 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.04■□□□□ -0
CD40P25942 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.04■□□□□ -0
CD40P25942 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.04■□□□□ -0
CD40P25942 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.04■□□□□ -0
CD40P25942 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.04■□□□□ -0
CD40P25942 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CD40P25942 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.04■□□□□ -0
CD40P25942 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms