Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL11A2P13942 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC21.11■□□□□ 0.97
COL11A2P13942 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC21.11■□□□□ 0.97
COL11A2P13942 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL11A2P13942 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC21.11■□□□□ 0.97
COL11A2P13942 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL11A2P13942 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC21.11■□□□□ 0.97
COL11A2P13942 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
COL11A2P13942 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC21.11■□□□□ 0.97
COL11A2P13942 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL11A2P13942 SSH2-211ENST00000590153 570 ntTSL 4 BASIC21.11■□□□□ 0.97
COL11A2P13942 AL031055.1-201ENST00000606362 631 ntBASIC21.11■□□□□ 0.97
COL11A2P13942 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.11■□□□□ 0.97
COL11A2P13942 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
COL11A2P13942 SRP9-204ENST00000619790 377 ntTSL 2 BASIC21.11■□□□□ 0.97
COL11A2P13942 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC21.11■□□□□ 0.97
COL11A2P13942 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.11■□□□□ 0.97
COL11A2P13942 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL11A2P13942 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL11A2P13942 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL11A2P13942 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL11A2P13942 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
COL11A2P13942 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL11A2P13942 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL11A2P13942 LINC00304-203ENST00000565008 1864 ntBASIC21.1■□□□□ 0.97
COL11A2P13942 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COL11A2P13942 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
COL11A2P13942 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL11A2P13942 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC21.1■□□□□ 0.97
COL11A2P13942 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL11A2P13942 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL11A2P13942 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC21.1■□□□□ 0.97
COL11A2P13942 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC21.1■□□□□ 0.97
COL11A2P13942 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC21.1■□□□□ 0.97
COL11A2P13942 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL11A2P13942 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC21.1■□□□□ 0.97
COL11A2P13942 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC21.1■□□□□ 0.97
COL11A2P13942 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC21.1■□□□□ 0.97
COL11A2P13942 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COL11A2P13942 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL11A2P13942 AC100757.3-201ENST00000622361 1406 ntBASIC21.1■□□□□ 0.97
COL11A2P13942 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL11A2P13942 OR8S1-201ENST00000310194 1080 ntBASIC21.09■□□□□ 0.97
COL11A2P13942 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC21.09■□□□□ 0.97
COL11A2P13942 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC21.09■□□□□ 0.97
COL11A2P13942 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC21.09■□□□□ 0.97
COL11A2P13942 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC21.09■□□□□ 0.97
COL11A2P13942 AP000842.3-202ENST00000569238 1080 ntBASIC21.09■□□□□ 0.97
COL11A2P13942 AC005412.3-201ENST00000580309 715 ntBASIC21.09■□□□□ 0.97
COL11A2P13942 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC21.09■□□□□ 0.97
COL11A2P13942 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC21.09■□□□□ 0.97
COL11A2P13942 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
COL11A2P13942 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC21.09■□□□□ 0.97
COL11A2P13942 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL11A2P13942 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL11A2P13942 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL11A2P13942 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL11A2P13942 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL11A2P13942 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL11A2P13942 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL11A2P13942 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
COL11A2P13942 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
COL11A2P13942 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL11A2P13942 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL11A2P13942 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL11A2P13942 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL11A2P13942 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL11A2P13942 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
COL11A2P13942 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL11A2P13942 NARF-206ENST00000457415 1668 ntTSL 5 BASIC21.09■□□□□ 0.97
COL11A2P13942 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.09■□□□□ 0.97
COL11A2P13942 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC21.08■□□□□ 0.97
COL11A2P13942 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL11A2P13942 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL11A2P13942 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL11A2P13942 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.08■□□□□ 0.97
COL11A2P13942 CALY-202ENST00000368555 783 ntTSL 2 BASIC21.08■□□□□ 0.97
COL11A2P13942 RNU1-129P-201ENST00000384064 167 ntBASIC21.08■□□□□ 0.97
COL11A2P13942 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC21.08■□□□□ 0.97
COL11A2P13942 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
COL11A2P13942 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC21.08■□□□□ 0.97
COL11A2P13942 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.08■□□□□ 0.97
COL11A2P13942 U1.21-201ENST00000580816 167 ntBASIC21.08■□□□□ 0.97
COL11A2P13942 SPDYE12P-201ENST00000618416 771 ntBASIC21.08■□□□□ 0.97
COL11A2P13942 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.08■□□□□ 0.96
COL11A2P13942 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
COL11A2P13942 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.96
COL11A2P13942 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
COL11A2P13942 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
COL11A2P13942 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COL11A2P13942 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL11A2P13942 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC21.07■□□□□ 0.96
COL11A2P13942 GK-202ENST00000378941 458 ntTSL 3 BASIC21.07■□□□□ 0.96
COL11A2P13942 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
COL11A2P13942 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC21.07■□□□□ 0.96
COL11A2P13942 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC21.07■□□□□ 0.96
COL11A2P13942 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC21.07■□□□□ 0.96
COL11A2P13942 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC21.07■□□□□ 0.96
COL11A2P13942 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC21.07■□□□□ 0.96
COL11A2P13942 AL139327.4-201ENST00000612362 153 ntBASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms