Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.28■□□□□ 0.36
COL6A2P12110 AC112907.2-201ENST00000448639 330 ntBASIC17.28■□□□□ 0.36
COL6A2P12110 KRT18P38-201ENST00000449496 1282 ntBASIC17.28■□□□□ 0.36
COL6A2P12110 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.28■□□□□ 0.36
COL6A2P12110 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.28■□□□□ 0.36
COL6A2P12110 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.28■□□□□ 0.36
COL6A2P12110 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.28■□□□□ 0.36
COL6A2P12110 AC019129.2-201ENST00000609837 1235 ntBASIC17.28■□□□□ 0.36
COL6A2P12110 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.28■□□□□ 0.36
COL6A2P12110 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.28■□□□□ 0.36
COL6A2P12110 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
COL6A2P12110 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
COL6A2P12110 Z83836.1-201ENST00000624605 1642 ntBASIC17.28■□□□□ 0.36
COL6A2P12110 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
COL6A2P12110 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.28■□□□□ 0.36
COL6A2P12110 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
COL6A2P12110 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
COL6A2P12110 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL6A2P12110 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.28■□□□□ 0.36
COL6A2P12110 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL6A2P12110 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.28■□□□□ 0.36
COL6A2P12110 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
COL6A2P12110 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COL6A2P12110 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
COL6A2P12110 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COL6A2P12110 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
COL6A2P12110 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.27■□□□□ 0.36
COL6A2P12110 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
COL6A2P12110 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.27■□□□□ 0.36
COL6A2P12110 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COL6A2P12110 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.27■□□□□ 0.36
COL6A2P12110 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.27■□□□□ 0.36
COL6A2P12110 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.27■□□□□ 0.36
COL6A2P12110 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
COL6A2P12110 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COL6A2P12110 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COL6A2P12110 AC122714.2-201ENST00000502787 707 ntBASIC17.27■□□□□ 0.36
COL6A2P12110 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
COL6A2P12110 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.27■□□□□ 0.36
COL6A2P12110 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.27■□□□□ 0.36
COL6A2P12110 AC133561.5-201ENST00000635547 218 ntBASIC17.27■□□□□ 0.36
COL6A2P12110 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
COL6A2P12110 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
COL6A2P12110 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
COL6A2P12110 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
COL6A2P12110 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
COL6A2P12110 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.27■□□□□ 0.35
COL6A2P12110 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
COL6A2P12110 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
COL6A2P12110 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
COL6A2P12110 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COL6A2P12110 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.26■□□□□ 0.35
COL6A2P12110 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL6A2P12110 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
COL6A2P12110 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
COL6A2P12110 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.26■□□□□ 0.35
COL6A2P12110 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COL6A2P12110 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
COL6A2P12110 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.26■□□□□ 0.35
COL6A2P12110 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL6A2P12110 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL6A2P12110 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL6A2P12110 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.26■□□□□ 0.35
COL6A2P12110 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL6A2P12110 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL6A2P12110 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
COL6A2P12110 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL6A2P12110 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
COL6A2P12110 AC007967.3-201ENST00000434308 558 ntBASIC17.26■□□□□ 0.35
COL6A2P12110 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.26■□□□□ 0.35
COL6A2P12110 VENTXP5-201ENST00000523979 775 ntBASIC17.26■□□□□ 0.35
COL6A2P12110 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COL6A2P12110 RNF126P1-202ENST00000569893 925 ntBASIC17.26■□□□□ 0.35
COL6A2P12110 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
COL6A2P12110 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
COL6A2P12110 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COL6A2P12110 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.26■□□□□ 0.35
COL6A2P12110 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL6A2P12110 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL6A2P12110 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL6A2P12110 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL6A2P12110 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL6A2P12110 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COL6A2P12110 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL6A2P12110 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL6A2P12110 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL6A2P12110 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
COL6A2P12110 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL6A2P12110 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.26■□□□□ 0.35
COL6A2P12110 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL6A2P12110 AC105020.1-201ENST00000435356 2205 ntBASIC17.25■□□□□ 0.35
COL6A2P12110 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
COL6A2P12110 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
COL6A2P12110 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.25■□□□□ 0.35
COL6A2P12110 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL6A2P12110 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COL6A2P12110 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
COL6A2P12110 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL6A2P12110 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
COL6A2P12110 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms