Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB40ALP0C0E4 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.47■□□□□ 0.23
RAB40ALP0C0E4 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RAB40ALP0C0E4 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RAB40ALP0C0E4 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.47■□□□□ 0.23
RAB40ALP0C0E4 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.47■□□□□ 0.23
RAB40ALP0C0E4 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.47■□□□□ 0.23
RAB40ALP0C0E4 AC109462.3-201ENST00000573934 613 ntBASIC16.47■□□□□ 0.23
RAB40ALP0C0E4 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.47■□□□□ 0.23
RAB40ALP0C0E4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB40ALP0C0E4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB40ALP0C0E4 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
RAB40ALP0C0E4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB40ALP0C0E4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.47■□□□□ 0.23
RAB40ALP0C0E4 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RAB40ALP0C0E4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB40ALP0C0E4 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB40ALP0C0E4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB40ALP0C0E4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.47■□□□□ 0.23
RAB40ALP0C0E4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RAB40ALP0C0E4 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
RAB40ALP0C0E4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB40ALP0C0E4 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.46■□□□□ 0.23
RAB40ALP0C0E4 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.46■□□□□ 0.23
RAB40ALP0C0E4 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.46■□□□□ 0.23
RAB40ALP0C0E4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RAB40ALP0C0E4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
RAB40ALP0C0E4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.46■□□□□ 0.23
RAB40ALP0C0E4 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.46■□□□□ 0.23
RAB40ALP0C0E4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RAB40ALP0C0E4 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RAB40ALP0C0E4 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.46■□□□□ 0.23
RAB40ALP0C0E4 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RAB40ALP0C0E4 AC108751.1-201ENST00000490852 363 ntBASIC16.46■□□□□ 0.23
RAB40ALP0C0E4 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.46■□□□□ 0.23
RAB40ALP0C0E4 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
RAB40ALP0C0E4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.46■□□□□ 0.23
RAB40ALP0C0E4 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.46■□□□□ 0.23
RAB40ALP0C0E4 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RAB40ALP0C0E4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.46■□□□□ 0.23
RAB40ALP0C0E4 STK25P1-201ENST00000585406 838 ntBASIC16.46■□□□□ 0.23
RAB40ALP0C0E4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.46■□□□□ 0.23
RAB40ALP0C0E4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.46■□□□□ 0.23
RAB40ALP0C0E4 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB40ALP0C0E4 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB40ALP0C0E4 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.46■□□□□ 0.23
RAB40ALP0C0E4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB40ALP0C0E4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.46■□□□□ 0.23
RAB40ALP0C0E4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.46■□□□□ 0.23
RAB40ALP0C0E4 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
RAB40ALP0C0E4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB40ALP0C0E4 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.46■□□□□ 0.23
RAB40ALP0C0E4 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
RAB40ALP0C0E4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
RAB40ALP0C0E4 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
RAB40ALP0C0E4 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 AC135776.1-201ENST00000319817 2481 ntBASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 MYCLP1-201ENST00000372451 1075 ntBASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 DNAJB3-201ENST00000446806 729 ntBASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 AC002558.1-201ENST00000488906 803 ntBASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 STK19B-204ENST00000512515 211 ntBASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms