Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 AC016734.2-201ENST00000624325 1377 ntBASIC16.09■□□□□ 0.17
THBS1P07996 AC012313.1-201ENST00000593393 3059 ntBASIC16.09■□□□□ 0.17
THBS1P07996 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
THBS1P07996 AL353593.2-201ENST00000602529 1483 ntBASIC16.09■□□□□ 0.17
THBS1P07996 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
THBS1P07996 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
THBS1P07996 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
THBS1P07996 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
THBS1P07996 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
THBS1P07996 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
THBS1P07996 AC009053.2-201ENST00000563701 2365 ntBASIC16.08■□□□□ 0.17
THBS1P07996 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.08■□□□□ 0.17
THBS1P07996 AC093525.9-201ENST00000624961 1746 ntBASIC16.08■□□□□ 0.17
THBS1P07996 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
THBS1P07996 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
THBS1P07996 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
THBS1P07996 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
THBS1P07996 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
THBS1P07996 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.08■□□□□ 0.16
THBS1P07996 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
THBS1P07996 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.08■□□□□ 0.16
THBS1P07996 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
THBS1P07996 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
THBS1P07996 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
THBS1P07996 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.08■□□□□ 0.16
THBS1P07996 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.08■□□□□ 0.16
THBS1P07996 SLC25A1P3-201ENST00000395415 828 ntBASIC16.08■□□□□ 0.16
THBS1P07996 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.08■□□□□ 0.16
THBS1P07996 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.08■□□□□ 0.16
THBS1P07996 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
THBS1P07996 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.08■□□□□ 0.16
THBS1P07996 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.08■□□□□ 0.16
THBS1P07996 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.08■□□□□ 0.16
THBS1P07996 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.08■□□□□ 0.16
THBS1P07996 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
THBS1P07996 AC011467.2-201ENST00000598425 242 ntBASIC16.08■□□□□ 0.16
THBS1P07996 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.08■□□□□ 0.16
THBS1P07996 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.08■□□□□ 0.16
THBS1P07996 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.08■□□□□ 0.16
THBS1P07996 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
THBS1P07996 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.08■□□□□ 0.16
THBS1P07996 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
THBS1P07996 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
THBS1P07996 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
THBS1P07996 LINC02012-201ENST00000608206 1725 ntBASIC16.08■□□□□ 0.16
THBS1P07996 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.08■□□□□ 0.16
THBS1P07996 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
THBS1P07996 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
THBS1P07996 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
THBS1P07996 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
THBS1P07996 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.07■□□□□ 0.16
THBS1P07996 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
THBS1P07996 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
THBS1P07996 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
THBS1P07996 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
THBS1P07996 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
THBS1P07996 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
THBS1P07996 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
THBS1P07996 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
THBS1P07996 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
THBS1P07996 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
THBS1P07996 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
THBS1P07996 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
THBS1P07996 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.07■□□□□ 0.16
THBS1P07996 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
THBS1P07996 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.07■□□□□ 0.16
THBS1P07996 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.07■□□□□ 0.16
THBS1P07996 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.07■□□□□ 0.16
THBS1P07996 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.07■□□□□ 0.16
THBS1P07996 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.07■□□□□ 0.16
THBS1P07996 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.07■□□□□ 0.16
THBS1P07996 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.07■□□□□ 0.16
THBS1P07996 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
THBS1P07996 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
THBS1P07996 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
THBS1P07996 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.07■□□□□ 0.16
THBS1P07996 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
THBS1P07996 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.07■□□□□ 0.16
THBS1P07996 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
THBS1P07996 KRT8P10-201ENST00000450021 1447 ntBASIC16.07■□□□□ 0.16
THBS1P07996 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
THBS1P07996 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.07■□□□□ 0.16
THBS1P07996 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.07■□□□□ 0.16
THBS1P07996 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
THBS1P07996 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
THBS1P07996 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.07■□□□□ 0.16
THBS1P07996 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
THBS1P07996 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
THBS1P07996 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.07■□□□□ 0.16
THBS1P07996 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
THBS1P07996 AC022211.2-201ENST00000585075 2527 ntBASIC16.07■□□□□ 0.16
THBS1P07996 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
THBS1P07996 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
THBS1P07996 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
THBS1P07996 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
THBS1P07996 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
THBS1P07996 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
THBS1P07996 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
THBS1P07996 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
THBS1P07996 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms