Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM2P07951 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC19.93■□□□□ 0.78
TPM2P07951 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM2P07951 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TPM2P07951 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC19.93■□□□□ 0.78
TPM2P07951 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
TPM2P07951 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TPM2P07951 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM2P07951 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM2P07951 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TPM2P07951 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM2P07951 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.93■□□□□ 0.78
TPM2P07951 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TPM2P07951 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.93■□□□□ 0.78
TPM2P07951 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM2P07951 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
TPM2P07951 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM2P07951 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TPM2P07951 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM2P07951 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM2P07951 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM2P07951 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
TPM2P07951 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TPM2P07951 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM2P07951 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.93■□□□□ 0.78
TPM2P07951 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM2P07951 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPM2P07951 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TPM2P07951 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPM2P07951 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.92■□□□□ 0.78
TPM2P07951 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPM2P07951 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.92■□□□□ 0.78
TPM2P07951 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TPM2P07951 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPM2P07951 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPM2P07951 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TPM2P07951 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TPM2P07951 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.92■□□□□ 0.78
TPM2P07951 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.92■□□□□ 0.78
TPM2P07951 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.92■□□□□ 0.78
TPM2P07951 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TPM2P07951 Z99916.2-201ENST00000604037 246 ntBASIC19.92■□□□□ 0.78
TPM2P07951 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.92■□□□□ 0.78
TPM2P07951 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPM2P07951 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.92■□□□□ 0.78
TPM2P07951 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.92■□□□□ 0.78
TPM2P07951 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPM2P07951 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.92■□□□□ 0.78
TPM2P07951 AL662844.4-201ENST00000606367 2838 ntBASIC19.92■□□□□ 0.78
TPM2P07951 AC092338.2-201ENST00000568827 1415 ntBASIC19.92■□□□□ 0.78
TPM2P07951 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPM2P07951 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TPM2P07951 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPM2P07951 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPM2P07951 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TPM2P07951 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.92■□□□□ 0.78
TPM2P07951 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TPM2P07951 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC19.91■□□□□ 0.78
TPM2P07951 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM2P07951 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
TPM2P07951 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM2P07951 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM2P07951 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM2P07951 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM2P07951 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC19.91■□□□□ 0.78
TPM2P07951 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM2P07951 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM2P07951 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
TPM2P07951 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TPM2P07951 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TPM2P07951 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.91■□□□□ 0.78
TPM2P07951 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM2P07951 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM2P07951 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM2P07951 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TPM2P07951 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TPM2P07951 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM2P07951 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM2P07951 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
TPM2P07951 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM2P07951 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM2P07951 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM2P07951 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.91■□□□□ 0.78
TPM2P07951 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM2P07951 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM2P07951 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.91■□□□□ 0.78
TPM2P07951 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM2P07951 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
TPM2P07951 AC008687.5-201ENST00000593746 558 ntBASIC19.91■□□□□ 0.78
TPM2P07951 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TPM2P07951 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
TPM2P07951 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.91■□□□□ 0.78
TPM2P07951 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC19.91■□□□□ 0.78
TPM2P07951 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM2P07951 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM2P07951 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
TPM2P07951 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TPM2P07951 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TPM2P07951 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM2P07951 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms