Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 AC105339.3-201ENST00000560043 636 ntBASIC20.89■□□□□ 0.93
POLR3DP05423 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.89■□□□□ 0.93
POLR3DP05423 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.89■□□□□ 0.93
POLR3DP05423 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.89■□□□□ 0.93
POLR3DP05423 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.89■□□□□ 0.93
POLR3DP05423 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
POLR3DP05423 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
POLR3DP05423 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
POLR3DP05423 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
POLR3DP05423 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
POLR3DP05423 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.89■□□□□ 0.93
POLR3DP05423 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
POLR3DP05423 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
POLR3DP05423 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
POLR3DP05423 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
POLR3DP05423 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
POLR3DP05423 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
POLR3DP05423 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.89■□□□□ 0.93
POLR3DP05423 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
POLR3DP05423 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
POLR3DP05423 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
POLR3DP05423 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
POLR3DP05423 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLR3DP05423 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLR3DP05423 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLR3DP05423 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLR3DP05423 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLR3DP05423 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
POLR3DP05423 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.88■□□□□ 0.93
POLR3DP05423 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.88■□□□□ 0.93
POLR3DP05423 MIR574-201ENST00000385209 96 ntBASIC20.88■□□□□ 0.93
POLR3DP05423 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.88■□□□□ 0.93
POLR3DP05423 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.88■□□□□ 0.93
POLR3DP05423 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.88■□□□□ 0.93
POLR3DP05423 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC20.88■□□□□ 0.93
POLR3DP05423 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLR3DP05423 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.88■□□□□ 0.93
POLR3DP05423 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.88■□□□□ 0.93
POLR3DP05423 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.88■□□□□ 0.93
POLR3DP05423 AL671883.3-201ENST00000603274 991 ntBASIC20.88■□□□□ 0.93
POLR3DP05423 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
POLR3DP05423 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.88■□□□□ 0.93
POLR3DP05423 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.88■□□□□ 0.93
POLR3DP05423 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
POLR3DP05423 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.87■□□□□ 0.93
POLR3DP05423 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
POLR3DP05423 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
POLR3DP05423 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
POLR3DP05423 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.87■□□□□ 0.93
POLR3DP05423 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.87■□□□□ 0.93
POLR3DP05423 AC098831.1-202ENST00000438821 336 ntBASIC20.87■□□□□ 0.93
POLR3DP05423 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
POLR3DP05423 AC106730.1-201ENST00000566722 1090 ntBASIC20.87■□□□□ 0.93
POLR3DP05423 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.87■□□□□ 0.93
POLR3DP05423 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.87■□□□□ 0.93
POLR3DP05423 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.87■□□□□ 0.93
POLR3DP05423 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.87■□□□□ 0.93
POLR3DP05423 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.87■□□□□ 0.93
POLR3DP05423 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
POLR3DP05423 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
POLR3DP05423 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.87■□□□□ 0.93
POLR3DP05423 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
POLR3DP05423 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.87■□□□□ 0.93
POLR3DP05423 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
POLR3DP05423 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
POLR3DP05423 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
POLR3DP05423 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
POLR3DP05423 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.86■□□□□ 0.93
POLR3DP05423 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
POLR3DP05423 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
POLR3DP05423 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
POLR3DP05423 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
POLR3DP05423 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
POLR3DP05423 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
POLR3DP05423 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
POLR3DP05423 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
POLR3DP05423 AC003669.1-201ENST00000334569 611 ntBASIC20.86■□□□□ 0.93
POLR3DP05423 SLC25A6P5-201ENST00000435663 894 ntBASIC20.86■□□□□ 0.93
POLR3DP05423 IGHV3-22-201ENST00000520721 359 ntBASIC20.86■□□□□ 0.93
POLR3DP05423 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
POLR3DP05423 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.86■□□□□ 0.93
POLR3DP05423 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.86■□□□□ 0.93
POLR3DP05423 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
POLR3DP05423 AP002414.3-201ENST00000589352 1468 ntBASIC20.86■□□□□ 0.93
POLR3DP05423 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.86■□□□□ 0.93
POLR3DP05423 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
POLR3DP05423 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
POLR3DP05423 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
POLR3DP05423 AC148477.5-201ENST00000625164 1645 ntBASIC20.86■□□□□ 0.93
POLR3DP05423 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
POLR3DP05423 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
POLR3DP05423 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.85■□□□□ 0.93
POLR3DP05423 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
POLR3DP05423 ZNF259P1-201ENST00000407656 1365 ntBASIC20.85■□□□□ 0.93
POLR3DP05423 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
POLR3DP05423 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
POLR3DP05423 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
POLR3DP05423 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
POLR3DP05423 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
POLR3DP05423 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms