Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC13.78□□□□□ -0.2
TRGV3P03979 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC13.78□□□□□ -0.2
TRGV3P03979 LINC01711-201ENST00000598340 967 ntBASIC13.78□□□□□ -0.2
TRGV3P03979 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRGV3P03979 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC13.78□□□□□ -0.2
TRGV3P03979 AC114341.1-201ENST00000618070 349 ntBASIC13.78□□□□□ -0.2
TRGV3P03979 LINC01451-201ENST00000623792 534 ntBASIC13.78□□□□□ -0.2
TRGV3P03979 CCNC-219ENST00000627680 896 ntTSL 5 BASIC13.78□□□□□ -0.2
TRGV3P03979 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRGV3P03979 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRGV3P03979 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRGV3P03979 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRGV3P03979 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRGV3P03979 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRGV3P03979 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRGV3P03979 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC13.78□□□□□ -0.2
TRGV3P03979 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC13.78□□□□□ -0.2
TRGV3P03979 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRGV3P03979 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC13.78□□□□□ -0.2
TRGV3P03979 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
TRGV3P03979 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC13.78□□□□□ -0.2
TRGV3P03979 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRGV3P03979 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC13.78□□□□□ -0.2
TRGV3P03979 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
TRGV3P03979 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
TRGV3P03979 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRGV3P03979 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRGV3P03979 AL355312.1-201ENST00000407115 2176 ntBASIC13.78□□□□□ -0.2
TRGV3P03979 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC13.78□□□□□ -0.2
TRGV3P03979 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRGV3P03979 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRGV3P03979 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC13.78□□□□□ -0.2
TRGV3P03979 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRGV3P03979 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
TRGV3P03979 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
TRGV3P03979 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRGV3P03979 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.2
TRGV3P03979 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
TRGV3P03979 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRGV3P03979 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.2
TRGV3P03979 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC13.77□□□□□ -0.2
TRGV3P03979 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRGV3P03979 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRGV3P03979 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRGV3P03979 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRGV3P03979 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRGV3P03979 RCN1P2-201ENST00000398357 915 ntBASIC13.77□□□□□ -0.21
TRGV3P03979 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC13.77□□□□□ -0.21
TRGV3P03979 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
TRGV3P03979 AC103564.2-201ENST00000432853 1299 ntBASIC13.77□□□□□ -0.21
TRGV3P03979 KRT16P4-201ENST00000453883 522 ntBASIC13.77□□□□□ -0.21
TRGV3P03979 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRGV3P03979 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
TRGV3P03979 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC13.77□□□□□ -0.21
TRGV3P03979 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
TRGV3P03979 AC122714.2-201ENST00000502787 707 ntBASIC13.77□□□□□ -0.21
TRGV3P03979 IGHV3-52-201ENST00000519770 353 ntBASIC13.77□□□□□ -0.21
TRGV3P03979 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRGV3P03979 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC13.77□□□□□ -0.21
TRGV3P03979 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
TRGV3P03979 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRGV3P03979 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC13.77□□□□□ -0.21
TRGV3P03979 AC111152.3-201ENST00000569699 673 ntBASIC13.77□□□□□ -0.21
TRGV3P03979 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC13.77□□□□□ -0.21
TRGV3P03979 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
TRGV3P03979 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC13.77□□□□□ -0.21
TRGV3P03979 CLEC4GP1-201ENST00000596555 870 ntBASIC13.77□□□□□ -0.21
TRGV3P03979 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRGV3P03979 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
TRGV3P03979 AL591684.3-201ENST00000605187 298 ntBASIC13.77□□□□□ -0.21
TRGV3P03979 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC13.77□□□□□ -0.21
TRGV3P03979 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRGV3P03979 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC13.77□□□□□ -0.21
TRGV3P03979 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRGV3P03979 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRGV3P03979 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
TRGV3P03979 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
TRGV3P03979 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC13.77□□□□□ -0.21
TRGV3P03979 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
TRGV3P03979 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TRGV3P03979 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRGV3P03979 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRGV3P03979 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRGV3P03979 SIRPAP1-201ENST00000448467 1770 ntBASIC13.76□□□□□ -0.21
TRGV3P03979 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC13.76□□□□□ -0.21
TRGV3P03979 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC13.76□□□□□ -0.21
TRGV3P03979 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC13.76□□□□□ -0.21
TRGV3P03979 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRGV3P03979 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
TRGV3P03979 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.76□□□□□ -0.21
TRGV3P03979 STK24-203ENST00000397517 4578 ntTSL 2 BASIC13.76□□□□□ -0.21
TRGV3P03979 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRGV3P03979 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC13.76□□□□□ -0.21
TRGV3P03979 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TRGV3P03979 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRGV3P03979 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRGV3P03979 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRGV3P03979 CD9-202ENST00000382515 1229 ntTSL 5 BASIC13.76□□□□□ -0.21
TRGV3P03979 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC13.76□□□□□ -0.21
TRGV3P03979 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms