Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV12-3P01733 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV12-3P01733 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV12-3P01733 AC141586.5-201ENST00000624546 2050 ntBASIC13.51□□□□□ -0.25
TRBV12-3P01733 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
TRBV12-3P01733 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC13.51□□□□□ -0.25
TRBV12-3P01733 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV12-3P01733 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
TRBV12-3P01733 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC13.51□□□□□ -0.25
TRBV12-3P01733 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV12-3P01733 AP005117.1-201ENST00000584346 1413 ntBASIC13.51□□□□□ -0.25
TRBV12-3P01733 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV12-3P01733 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV12-3P01733 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV12-3P01733 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV12-3P01733 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV12-3P01733 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC13.51□□□□□ -0.25
TRBV12-3P01733 KLF4P1-201ENST00000412782 1185 ntBASIC13.51□□□□□ -0.25
TRBV12-3P01733 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV12-3P01733 AF238378.1-201ENST00000526806 358 ntBASIC13.51□□□□□ -0.25
TRBV12-3P01733 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV12-3P01733 RN7SL510P-201ENST00000581311 263 ntBASIC13.51□□□□□ -0.25
TRBV12-3P01733 STK25P1-201ENST00000585406 838 ntBASIC13.51□□□□□ -0.25
TRBV12-3P01733 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV12-3P01733 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC13.51□□□□□ -0.25
TRBV12-3P01733 TK1-204ENST00000590430 683 ntTSL 3 BASIC13.51□□□□□ -0.25
TRBV12-3P01733 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV12-3P01733 AL139327.4-201ENST00000612362 153 ntBASIC13.51□□□□□ -0.25
TRBV12-3P01733 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC13.51□□□□□ -0.25
TRBV12-3P01733 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV12-3P01733 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV12-3P01733 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV12-3P01733 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC13.51□□□□□ -0.25
TRBV12-3P01733 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC13.51□□□□□ -0.25
TRBV12-3P01733 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV12-3P01733 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV12-3P01733 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV12-3P01733 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV12-3P01733 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV12-3P01733 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC13.5□□□□□ -0.25
TRBV12-3P01733 AC148477.5-201ENST00000625164 1645 ntBASIC13.5□□□□□ -0.25
TRBV12-3P01733 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV12-3P01733 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV12-3P01733 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV12-3P01733 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC13.5□□□□□ -0.25
TRBV12-3P01733 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV12-3P01733 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
TRBV12-3P01733 PKD1P1-201ENST00000458669 6805 ntBASIC13.5□□□□□ -0.25
TRBV12-3P01733 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV12-3P01733 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV12-3P01733 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
TRBV12-3P01733 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV12-3P01733 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV12-3P01733 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV12-3P01733 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC13.5□□□□□ -0.25
TRBV12-3P01733 SOD2-201ENST00000337404 991 ntTSL 2 BASIC13.5□□□□□ -0.25
TRBV12-3P01733 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV12-3P01733 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV12-3P01733 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV12-3P01733 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV12-3P01733 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC13.5□□□□□ -0.25
TRBV12-3P01733 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.5□□□□□ -0.25
TRBV12-3P01733 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV12-3P01733 SRP19-202ENST00000445150 833 ntTSL 2 BASIC13.5□□□□□ -0.25
TRBV12-3P01733 SAPCD2P3-201ENST00000455031 850 ntBASIC13.5□□□□□ -0.25
TRBV12-3P01733 AC106795.1-205ENST00000512851 1056 ntBASIC13.5□□□□□ -0.25
TRBV12-3P01733 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC13.5□□□□□ -0.25
TRBV12-3P01733 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV12-3P01733 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV12-3P01733 MTDHP3-201ENST00000594186 672 ntBASIC13.5□□□□□ -0.25
TRBV12-3P01733 AC008608.2-201ENST00000606089 416 ntBASIC13.5□□□□□ -0.25
TRBV12-3P01733 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC13.5□□□□□ -0.25
TRBV12-3P01733 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC13.5□□□□□ -0.25
TRBV12-3P01733 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV12-3P01733 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV12-3P01733 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV12-3P01733 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
TRBV12-3P01733 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV12-3P01733 CROCCP2-202ENST00000412962 2773 ntBASIC13.5□□□□□ -0.25
TRBV12-3P01733 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV12-3P01733 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV12-3P01733 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC13.5□□□□□ -0.25
TRBV12-3P01733 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV12-3P01733 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV12-3P01733 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
TRBV12-3P01733 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV12-3P01733 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
TRBV12-3P01733 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV12-3P01733 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC13.5□□□□□ -0.25
TRBV12-3P01733 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV12-3P01733 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV12-3P01733 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV12-3P01733 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV12-3P01733 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC13.49□□□□□ -0.25
TRBV12-3P01733 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
TRBV12-3P01733 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV12-3P01733 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV12-3P01733 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV12-3P01733 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC13.49□□□□□ -0.25
TRBV12-3P01733 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms