Protein–RNA interactions for Protein: O95833

CLIC3, Chloride intracellular channel protein 3, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3O95833 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLIC3O95833 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLIC3O95833 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLIC3O95833 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLIC3O95833 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLIC3O95833 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
CLIC3O95833 MFAP1P1-201ENST00000442257 1255 ntBASIC16.17■□□□□ 0.18
CLIC3O95833 AC133681.1-201ENST00000465482 601 ntBASIC16.17■□□□□ 0.18
CLIC3O95833 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.17■□□□□ 0.18
CLIC3O95833 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.17■□□□□ 0.18
CLIC3O95833 AC009065.1-201ENST00000564055 1225 ntBASIC16.17■□□□□ 0.18
CLIC3O95833 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.17■□□□□ 0.18
CLIC3O95833 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.17■□□□□ 0.18
CLIC3O95833 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLIC3O95833 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLIC3O95833 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
CLIC3O95833 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.17■□□□□ 0.18
CLIC3O95833 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLIC3O95833 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLIC3O95833 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CLIC3O95833 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLIC3O95833 AC022188.1-201ENST00000620960 1664 ntBASIC16.17■□□□□ 0.18
CLIC3O95833 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
CLIC3O95833 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLIC3O95833 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLIC3O95833 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLIC3O95833 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.17■□□□□ 0.18
CLIC3O95833 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLIC3O95833 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.16■□□□□ 0.18
CLIC3O95833 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.16■□□□□ 0.18
CLIC3O95833 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLIC3O95833 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLIC3O95833 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.16■□□□□ 0.18
CLIC3O95833 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
CLIC3O95833 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLIC3O95833 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.16■□□□□ 0.18
CLIC3O95833 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CLIC3O95833 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLIC3O95833 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLIC3O95833 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLIC3O95833 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLIC3O95833 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
CLIC3O95833 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLIC3O95833 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.16■□□□□ 0.18
CLIC3O95833 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.16■□□□□ 0.18
CLIC3O95833 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
CLIC3O95833 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLIC3O95833 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLIC3O95833 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLIC3O95833 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CLIC3O95833 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CLIC3O95833 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CLIC3O95833 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLIC3O95833 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLIC3O95833 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLIC3O95833 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.16■□□□□ 0.18
CLIC3O95833 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLIC3O95833 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CLIC3O95833 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLIC3O95833 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLIC3O95833 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLIC3O95833 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLIC3O95833 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CLIC3O95833 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLIC3O95833 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CLIC3O95833 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CLIC3O95833 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLIC3O95833 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLIC3O95833 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLIC3O95833 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLIC3O95833 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLIC3O95833 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLIC3O95833 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLIC3O95833 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLIC3O95833 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLIC3O95833 DDX43P3-201ENST00000441064 443 ntBASIC16.15■□□□□ 0.18
CLIC3O95833 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.15■□□□□ 0.18
CLIC3O95833 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.15■□□□□ 0.18
CLIC3O95833 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLIC3O95833 AC104390.1-201ENST00000555663 520 ntBASIC16.15■□□□□ 0.18
CLIC3O95833 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.15■□□□□ 0.18
CLIC3O95833 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.15■□□□□ 0.18
CLIC3O95833 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLIC3O95833 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLIC3O95833 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CLIC3O95833 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.15■□□□□ 0.18
CLIC3O95833 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLIC3O95833 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.15■□□□□ 0.18
CLIC3O95833 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLIC3O95833 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLIC3O95833 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.15■□□□□ 0.18
CLIC3O95833 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLIC3O95833 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLIC3O95833 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLIC3O95833 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLIC3O95833 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.15■□□□□ 0.18
CLIC3O95833 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLIC3O95833 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CLIC3O95833 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLIC3O95833 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms