Protein–RNA interactions for Protein: O95407

TNFRSF6B, Tumor necrosis factor receptor superfamily member 6B, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF6BO95407 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TNFRSF6BO95407 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TNFRSF6BO95407 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC12.73□□□□□ -0.37
TNFRSF6BO95407 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC12.73□□□□□ -0.37
TNFRSF6BO95407 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TNFRSF6BO95407 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
TNFRSF6BO95407 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TNFRSF6BO95407 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TNFRSF6BO95407 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TNFRSF6BO95407 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
TNFRSF6BO95407 SERF2-207ENST00000409614 582 ntTSL 2 BASIC12.73□□□□□ -0.37
TNFRSF6BO95407 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC12.73□□□□□ -0.37
TNFRSF6BO95407 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC12.73□□□□□ -0.37
TNFRSF6BO95407 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TNFRSF6BO95407 AL353807.1-201ENST00000427475 662 ntBASIC12.73□□□□□ -0.37
TNFRSF6BO95407 AC069152.1-201ENST00000438030 544 ntBASIC12.73□□□□□ -0.37
TNFRSF6BO95407 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC12.73□□□□□ -0.37
TNFRSF6BO95407 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC12.73□□□□□ -0.37
TNFRSF6BO95407 AP003097.1-201ENST00000530657 1135 ntBASIC12.73□□□□□ -0.37
TNFRSF6BO95407 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC12.73□□□□□ -0.37
TNFRSF6BO95407 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC12.73□□□□□ -0.37
TNFRSF6BO95407 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC12.73□□□□□ -0.37
TNFRSF6BO95407 IKBKGP1-201ENST00000612193 1073 ntBASIC12.73□□□□□ -0.37
TNFRSF6BO95407 CABP2-204ENST00000636477 941 ntTSL 5 BASIC12.73□□□□□ -0.37
TNFRSF6BO95407 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TNFRSF6BO95407 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC12.73□□□□□ -0.37
TNFRSF6BO95407 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TNFRSF6BO95407 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TNFRSF6BO95407 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TNFRSF6BO95407 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
TNFRSF6BO95407 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TNFRSF6BO95407 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TNFRSF6BO95407 MYB-242ENST00000618728 3545 ntTSL 5 BASIC12.73□□□□□ -0.37
TNFRSF6BO95407 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC12.73□□□□□ -0.37
TNFRSF6BO95407 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TNFRSF6BO95407 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TNFRSF6BO95407 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
TNFRSF6BO95407 HYMAI-201ENST00000635591 3347 ntBASIC12.73□□□□□ -0.37
TNFRSF6BO95407 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TNFRSF6BO95407 LYSMD4-203ENST00000378904 2122 ntBASIC12.73□□□□□ -0.37
TNFRSF6BO95407 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TNFRSF6BO95407 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
TNFRSF6BO95407 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC12.73□□□□□ -0.37
TNFRSF6BO95407 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC12.72□□□□□ -0.37
TNFRSF6BO95407 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TNFRSF6BO95407 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
TNFRSF6BO95407 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TNFRSF6BO95407 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TNFRSF6BO95407 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TNFRSF6BO95407 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC12.72□□□□□ -0.37
TNFRSF6BO95407 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TNFRSF6BO95407 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC12.72□□□□□ -0.37
TNFRSF6BO95407 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC12.72□□□□□ -0.37
TNFRSF6BO95407 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TNFRSF6BO95407 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TNFRSF6BO95407 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
TNFRSF6BO95407 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC12.72□□□□□ -0.37
TNFRSF6BO95407 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TNFRSF6BO95407 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TNFRSF6BO95407 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TNFRSF6BO95407 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
TNFRSF6BO95407 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
TNFRSF6BO95407 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC12.72□□□□□ -0.37
TNFRSF6BO95407 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TNFRSF6BO95407 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TNFRSF6BO95407 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC12.72□□□□□ -0.37
TNFRSF6BO95407 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
TNFRSF6BO95407 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC12.72□□□□□ -0.37
TNFRSF6BO95407 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC12.72□□□□□ -0.37
TNFRSF6BO95407 FDX2-207ENST00000494368 584 ntTSL 4 BASIC12.72□□□□□ -0.37
TNFRSF6BO95407 DLX3-202ENST00000512495 834 ntTSL 2 BASIC12.72□□□□□ -0.37
TNFRSF6BO95407 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
TNFRSF6BO95407 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC12.72□□□□□ -0.37
TNFRSF6BO95407 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC12.72□□□□□ -0.37
TNFRSF6BO95407 AC124016.1-201ENST00000609552 612 ntBASIC12.72□□□□□ -0.37
TNFRSF6BO95407 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC12.72□□□□□ -0.37
TNFRSF6BO95407 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TNFRSF6BO95407 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TNFRSF6BO95407 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TNFRSF6BO95407 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC12.72□□□□□ -0.37
TNFRSF6BO95407 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TNFRSF6BO95407 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
TNFRSF6BO95407 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TNFRSF6BO95407 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
TNFRSF6BO95407 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC12.72□□□□□ -0.37
TNFRSF6BO95407 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
TNFRSF6BO95407 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TNFRSF6BO95407 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TNFRSF6BO95407 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
TNFRSF6BO95407 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC12.71□□□□□ -0.37
TNFRSF6BO95407 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TNFRSF6BO95407 CYP2T1P-202ENST00000641596 2535 ntBASIC12.71□□□□□ -0.37
TNFRSF6BO95407 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC12.71□□□□□ -0.37
TNFRSF6BO95407 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TNFRSF6BO95407 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TNFRSF6BO95407 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TNFRSF6BO95407 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
TNFRSF6BO95407 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
TNFRSF6BO95407 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TNFRSF6BO95407 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms