Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1BO75841 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
UPK1BO75841 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1BO75841 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1BO75841 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
UPK1BO75841 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
UPK1BO75841 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
UPK1BO75841 AC110285.6-201ENST00000617652 491 ntBASIC15.23■□□□□ 0.03
UPK1BO75841 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.23■□□□□ 0.03
UPK1BO75841 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1BO75841 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1BO75841 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1BO75841 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1BO75841 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1BO75841 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1BO75841 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.23■□□□□ 0.03
UPK1BO75841 AC073347.1-201ENST00000421633 2643 ntBASIC15.23■□□□□ 0.03
UPK1BO75841 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1BO75841 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1BO75841 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1BO75841 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1BO75841 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK1BO75841 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1BO75841 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.22■□□□□ 0.03
UPK1BO75841 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.22■□□□□ 0.03
UPK1BO75841 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1BO75841 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1BO75841 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1BO75841 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1BO75841 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1BO75841 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1BO75841 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1BO75841 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.22■□□□□ 0.03
UPK1BO75841 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1BO75841 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
UPK1BO75841 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1BO75841 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
UPK1BO75841 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
UPK1BO75841 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1BO75841 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1BO75841 ABHD17AP6-201ENST00000458502 1044 ntBASIC15.22■□□□□ 0.03
UPK1BO75841 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC15.22■□□□□ 0.03
UPK1BO75841 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
UPK1BO75841 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
UPK1BO75841 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1BO75841 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1BO75841 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
UPK1BO75841 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1BO75841 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1BO75841 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.22■□□□□ 0.03
UPK1BO75841 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1BO75841 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.22■□□□□ 0.03
UPK1BO75841 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
UPK1BO75841 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1BO75841 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
UPK1BO75841 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1BO75841 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1BO75841 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1BO75841 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.22■□□□□ 0.03
UPK1BO75841 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1BO75841 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1BO75841 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
UPK1BO75841 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
UPK1BO75841 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.21■□□□□ 0.03
UPK1BO75841 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UPK1BO75841 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.21■□□□□ 0.03
UPK1BO75841 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UPK1BO75841 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
UPK1BO75841 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
UPK1BO75841 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.21■□□□□ 0.03
UPK1BO75841 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.21■□□□□ 0.03
UPK1BO75841 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.21■□□□□ 0.03
UPK1BO75841 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.21■□□□□ 0.03
UPK1BO75841 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UPK1BO75841 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
UPK1BO75841 SLC25A1P3-201ENST00000395415 828 ntBASIC15.21■□□□□ 0.03
UPK1BO75841 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
UPK1BO75841 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
UPK1BO75841 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC15.21■□□□□ 0.03
UPK1BO75841 DDX43P3-201ENST00000441064 443 ntBASIC15.21■□□□□ 0.03
UPK1BO75841 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC15.21■□□□□ 0.03
UPK1BO75841 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC15.21■□□□□ 0.03
UPK1BO75841 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC15.21■□□□□ 0.03
UPK1BO75841 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UPK1BO75841 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC15.21■□□□□ 0.03
UPK1BO75841 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC15.21■□□□□ 0.03
UPK1BO75841 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC15.21■□□□□ 0.03
UPK1BO75841 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
UPK1BO75841 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UPK1BO75841 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
UPK1BO75841 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
UPK1BO75841 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.21■□□□□ 0.03
UPK1BO75841 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
UPK1BO75841 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
UPK1BO75841 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
UPK1BO75841 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
UPK1BO75841 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
UPK1BO75841 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
UPK1BO75841 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
UPK1BO75841 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.21■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms