Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ARHGEF9O43307 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
ARHGEF9O43307 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ARHGEF9O43307 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.27■□□□□ 0.2
ARHGEF9O43307 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.27■□□□□ 0.2
ARHGEF9O43307 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ARHGEF9O43307 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.27■□□□□ 0.2
ARHGEF9O43307 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ARHGEF9O43307 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
ARHGEF9O43307 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ARHGEF9O43307 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
ARHGEF9O43307 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ARHGEF9O43307 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.27■□□□□ 0.2
ARHGEF9O43307 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.27■□□□□ 0.2
ARHGEF9O43307 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.27■□□□□ 0.2
ARHGEF9O43307 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
ARHGEF9O43307 AL162727.3-201ENST00000635661 2787 ntBASIC16.27■□□□□ 0.2
ARHGEF9O43307 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.27■□□□□ 0.19
ARHGEF9O43307 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
ARHGEF9O43307 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.27■□□□□ 0.19
ARHGEF9O43307 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ARHGEF9O43307 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.27■□□□□ 0.19
ARHGEF9O43307 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ARHGEF9O43307 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
ARHGEF9O43307 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF9O43307 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.26■□□□□ 0.19
ARHGEF9O43307 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF9O43307 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.26■□□□□ 0.19
ARHGEF9O43307 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF9O43307 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF9O43307 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF9O43307 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF9O43307 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.26■□□□□ 0.19
ARHGEF9O43307 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
ARHGEF9O43307 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
ARHGEF9O43307 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF9O43307 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF9O43307 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF9O43307 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
ARHGEF9O43307 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
ARHGEF9O43307 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF9O43307 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF9O43307 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF9O43307 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
ARHGEF9O43307 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.26■□□□□ 0.19
ARHGEF9O43307 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF9O43307 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.26■□□□□ 0.19
ARHGEF9O43307 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF9O43307 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.26■□□□□ 0.19
ARHGEF9O43307 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF9O43307 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.26■□□□□ 0.19
ARHGEF9O43307 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF9O43307 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.26■□□□□ 0.19
ARHGEF9O43307 SEC1P-202ENST00000473944 940 ntBASIC16.26■□□□□ 0.19
ARHGEF9O43307 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.26■□□□□ 0.19
ARHGEF9O43307 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.26■□□□□ 0.19
ARHGEF9O43307 ZNF444P1-201ENST00000559497 298 ntBASIC16.26■□□□□ 0.19
ARHGEF9O43307 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF9O43307 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
ARHGEF9O43307 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF9O43307 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF9O43307 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.26■□□□□ 0.19
ARHGEF9O43307 AL024508.2-201ENST00000607749 1894 ntBASIC16.26■□□□□ 0.19
ARHGEF9O43307 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
ARHGEF9O43307 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF9O43307 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF9O43307 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF9O43307 AC093010.1-201ENST00000473625 1624 ntBASIC16.26■□□□□ 0.19
ARHGEF9O43307 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF9O43307 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
ARHGEF9O43307 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF9O43307 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF9O43307 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF9O43307 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
ARHGEF9O43307 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF9O43307 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.26■□□□□ 0.19
ARHGEF9O43307 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ARHGEF9O43307 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ARHGEF9O43307 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.25■□□□□ 0.19
ARHGEF9O43307 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ARHGEF9O43307 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ARHGEF9O43307 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ARHGEF9O43307 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
ARHGEF9O43307 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.25■□□□□ 0.19
ARHGEF9O43307 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ARHGEF9O43307 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ARHGEF9O43307 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.25■□□□□ 0.19
ARHGEF9O43307 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ARHGEF9O43307 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.25■□□□□ 0.19
ARHGEF9O43307 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
ARHGEF9O43307 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ARHGEF9O43307 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ARHGEF9O43307 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ARHGEF9O43307 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.25■□□□□ 0.19
ARHGEF9O43307 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.25■□□□□ 0.19
ARHGEF9O43307 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.25■□□□□ 0.19
ARHGEF9O43307 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.25■□□□□ 0.19
ARHGEF9O43307 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.25■□□□□ 0.19
ARHGEF9O43307 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.25■□□□□ 0.19
ARHGEF9O43307 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms