Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 ATP5C1P1-201ENST00000441945 895 ntBASIC23.96■■□□□ 1.43
MSH5O43196 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC23.96■■□□□ 1.43
MSH5O43196 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC23.96■■□□□ 1.43
MSH5O43196 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC23.96■■□□□ 1.43
MSH5O43196 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
MSH5O43196 AC087888.1-201ENST00000550884 1254 ntBASIC23.96■■□□□ 1.43
MSH5O43196 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC23.96■■□□□ 1.43
MSH5O43196 RPS29-206ENST00000557111 488 ntTSL 2 BASIC23.96■■□□□ 1.43
MSH5O43196 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC23.96■■□□□ 1.43
MSH5O43196 AC064862.7-201ENST00000604520 867 ntBASIC23.96■■□□□ 1.43
MSH5O43196 AC005609.4-201ENST00000625071 447 ntBASIC23.96■■□□□ 1.43
MSH5O43196 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC23.96■■□□□ 1.43
MSH5O43196 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
MSH5O43196 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
MSH5O43196 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
MSH5O43196 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
MSH5O43196 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
MSH5O43196 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
MSH5O43196 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC23.96■■□□□ 1.43
MSH5O43196 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
MSH5O43196 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.43
MSH5O43196 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC23.95■■□□□ 1.43
MSH5O43196 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC23.95■■□□□ 1.42
MSH5O43196 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
MSH5O43196 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
MSH5O43196 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
MSH5O43196 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
MSH5O43196 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
MSH5O43196 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
MSH5O43196 ABALON-201ENST00000629058 1903 ntBASIC23.95■■□□□ 1.42
MSH5O43196 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
MSH5O43196 AF228730.1-201ENST00000397972 663 ntBASIC23.95■■□□□ 1.42
MSH5O43196 MIR940-201ENST00000401276 94 ntBASIC23.95■■□□□ 1.42
MSH5O43196 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC23.95■■□□□ 1.42
MSH5O43196 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC23.95■■□□□ 1.42
MSH5O43196 AC097493.2-201ENST00000468675 780 ntBASIC23.95■■□□□ 1.42
MSH5O43196 RPS3AP15-201ENST00000483874 781 ntBASIC23.95■■□□□ 1.42
MSH5O43196 AC105233.1-201ENST00000498840 781 ntBASIC23.95■■□□□ 1.42
MSH5O43196 AC010460.2-201ENST00000509054 677 ntBASIC23.95■■□□□ 1.42
MSH5O43196 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC23.95■■□□□ 1.42
MSH5O43196 NSMCE2-208ENST00000520866 1183 ntTSL 2 BASIC23.95■■□□□ 1.42
MSH5O43196 ARL1-203ENST00000539055 1231 ntTSL 2 BASIC23.95■■□□□ 1.42
MSH5O43196 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
MSH5O43196 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC23.95■■□□□ 1.42
MSH5O43196 AC005332.3-201ENST00000589904 676 ntBASIC23.95■■□□□ 1.42
MSH5O43196 Z69720.1-201ENST00000601483 472 ntBASIC23.95■■□□□ 1.42
MSH5O43196 LITAF-220ENST00000620789 692 ntTSL 5 BASIC23.95■■□□□ 1.42
MSH5O43196 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC23.95■■□□□ 1.42
MSH5O43196 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC23.95■■□□□ 1.42
MSH5O43196 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
MSH5O43196 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC23.95■■□□□ 1.42
MSH5O43196 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
MSH5O43196 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
MSH5O43196 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
MSH5O43196 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
MSH5O43196 NF2-208ENST00000403435 2568 ntTSL 5 BASIC23.95■■□□□ 1.42
MSH5O43196 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
MSH5O43196 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
MSH5O43196 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
MSH5O43196 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC23.94■■□□□ 1.42
MSH5O43196 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
MSH5O43196 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
MSH5O43196 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
MSH5O43196 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC23.94■■□□□ 1.42
MSH5O43196 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
MSH5O43196 NUCKS1P1-201ENST00000452067 703 ntBASIC23.94■■□□□ 1.42
MSH5O43196 SAPCD2P3-201ENST00000455031 850 ntBASIC23.94■■□□□ 1.42
MSH5O43196 AL122001.1-201ENST00000457027 370 ntBASIC23.94■■□□□ 1.42
MSH5O43196 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC23.94■■□□□ 1.42
MSH5O43196 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC23.94■■□□□ 1.42
MSH5O43196 POLD2P1-201ENST00000511220 997 ntBASIC23.94■■□□□ 1.42
MSH5O43196 S100Z-202ENST00000513010 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
MSH5O43196 ABR-204ENST00000543210 1049 ntTSL 2 BASIC23.94■■□□□ 1.42
MSH5O43196 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC23.94■■□□□ 1.42
MSH5O43196 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC23.94■■□□□ 1.42
MSH5O43196 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
MSH5O43196 AC026979.4-201ENST00000606555 645 ntBASIC23.94■■□□□ 1.42
MSH5O43196 AP003485.1-201ENST00000625093 753 ntBASIC23.94■■□□□ 1.42
MSH5O43196 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
MSH5O43196 AC009237.14-201ENST00000609975 1594 ntBASIC23.94■■□□□ 1.42
MSH5O43196 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
MSH5O43196 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
MSH5O43196 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
MSH5O43196 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC23.94■■□□□ 1.42
MSH5O43196 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC23.94■■□□□ 1.42
MSH5O43196 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
MSH5O43196 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC23.93■■□□□ 1.42
MSH5O43196 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
MSH5O43196 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
MSH5O43196 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
MSH5O43196 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
MSH5O43196 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
MSH5O43196 MGST3-204ENST00000367888 778 ntTSL 3 BASIC23.93■■□□□ 1.42
MSH5O43196 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC23.93■■□□□ 1.42
MSH5O43196 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC23.93■■□□□ 1.42
MSH5O43196 MTCO1P21-201ENST00000416634 589 ntBASIC23.93■■□□□ 1.42
MSH5O43196 AC005154.1-201ENST00000434399 1217 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
MSH5O43196 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC23.93■■□□□ 1.42
MSH5O43196 AP003733.1-201ENST00000491725 852 ntBASIC23.93■■□□□ 1.42
MSH5O43196 KRT18P58-201ENST00000527480 1120 ntBASIC23.93■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms