Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDLIM1O00151 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
PDLIM1O00151 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PDLIM1O00151 AC007663.1-201ENST00000438948 1240 ntBASIC16.69■□□□□ 0.26
PDLIM1O00151 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.69■□□□□ 0.26
PDLIM1O00151 AC128688.1-201ENST00000487626 519 ntBASIC16.69■□□□□ 0.26
PDLIM1O00151 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.69■□□□□ 0.26
PDLIM1O00151 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.69■□□□□ 0.26
PDLIM1O00151 AC010653.2-201ENST00000623505 997 ntBASIC16.69■□□□□ 0.26
PDLIM1O00151 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDLIM1O00151 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDLIM1O00151 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDLIM1O00151 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDLIM1O00151 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PDLIM1O00151 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.69■□□□□ 0.26
PDLIM1O00151 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDLIM1O00151 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDLIM1O00151 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.69■□□□□ 0.26
PDLIM1O00151 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDLIM1O00151 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PDLIM1O00151 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PDLIM1O00151 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDLIM1O00151 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PDLIM1O00151 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDLIM1O00151 HLA-J-201ENST00000462773 1622 ntBASIC16.68■□□□□ 0.26
PDLIM1O00151 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.68■□□□□ 0.26
PDLIM1O00151 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PDLIM1O00151 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.68■□□□□ 0.26
PDLIM1O00151 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.68■□□□□ 0.26
PDLIM1O00151 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDLIM1O00151 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.68■□□□□ 0.26
PDLIM1O00151 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.68■□□□□ 0.26
PDLIM1O00151 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PDLIM1O00151 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.68■□□□□ 0.26
PDLIM1O00151 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.68■□□□□ 0.26
PDLIM1O00151 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PDLIM1O00151 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.68■□□□□ 0.26
PDLIM1O00151 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDLIM1O00151 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PDLIM1O00151 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PDLIM1O00151 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDLIM1O00151 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDLIM1O00151 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.68■□□□□ 0.26
PDLIM1O00151 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDLIM1O00151 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PDLIM1O00151 OR6D1P-203ENST00000641209 4860 ntBASIC16.68■□□□□ 0.26
PDLIM1O00151 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDLIM1O00151 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.68■□□□□ 0.26
PDLIM1O00151 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
PDLIM1O00151 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PDLIM1O00151 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDLIM1O00151 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDLIM1O00151 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDLIM1O00151 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PDLIM1O00151 AC104640.1-201ENST00000562617 2109 ntBASIC16.67■□□□□ 0.26
PDLIM1O00151 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PDLIM1O00151 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDLIM1O00151 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDLIM1O00151 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDLIM1O00151 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PDLIM1O00151 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
PDLIM1O00151 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.67■□□□□ 0.26
PDLIM1O00151 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDLIM1O00151 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDLIM1O00151 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDLIM1O00151 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDLIM1O00151 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.67■□□□□ 0.26
PDLIM1O00151 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PDLIM1O00151 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
PDLIM1O00151 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDLIM1O00151 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.67■□□□□ 0.26
PDLIM1O00151 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.67■□□□□ 0.26
PDLIM1O00151 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDLIM1O00151 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.67■□□□□ 0.26
PDLIM1O00151 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.67■□□□□ 0.26
PDLIM1O00151 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDLIM1O00151 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PDLIM1O00151 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDLIM1O00151 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDLIM1O00151 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDLIM1O00151 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDLIM1O00151 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PDLIM1O00151 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDLIM1O00151 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
PDLIM1O00151 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDLIM1O00151 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.66■□□□□ 0.26
PDLIM1O00151 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PDLIM1O00151 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDLIM1O00151 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDLIM1O00151 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.66■□□□□ 0.26
PDLIM1O00151 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDLIM1O00151 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDLIM1O00151 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDLIM1O00151 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDLIM1O00151 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDLIM1O00151 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDLIM1O00151 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.66■□□□□ 0.26
PDLIM1O00151 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.66■□□□□ 0.26
PDLIM1O00151 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PDLIM1O00151 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms