Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.03■□□□□ -0
MEIS3P1A6NDR6 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MEIS3P1A6NDR6 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
MEIS3P1A6NDR6 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
MEIS3P1A6NDR6 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
MEIS3P1A6NDR6 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MEIS3P1A6NDR6 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
MEIS3P1A6NDR6 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MEIS3P1A6NDR6 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.03■□□□□ -0
MEIS3P1A6NDR6 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.02■□□□□ -0
MEIS3P1A6NDR6 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
MEIS3P1A6NDR6 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.02■□□□□ -0
MEIS3P1A6NDR6 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.02■□□□□ -0
MEIS3P1A6NDR6 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
MEIS3P1A6NDR6 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MEIS3P1A6NDR6 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.02■□□□□ -0
MEIS3P1A6NDR6 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.02■□□□□ -0
MEIS3P1A6NDR6 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MEIS3P1A6NDR6 LINC00554-201ENST00000564841 3011 ntBASIC15.02■□□□□ -0
MEIS3P1A6NDR6 RNF216P1-203ENST00000404404 2427 ntBASIC15.02■□□□□ -0
MEIS3P1A6NDR6 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MEIS3P1A6NDR6 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC15.02■□□□□ -0
MEIS3P1A6NDR6 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC15.02■□□□□ -0
MEIS3P1A6NDR6 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.02■□□□□ -0
MEIS3P1A6NDR6 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MEIS3P1A6NDR6 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MEIS3P1A6NDR6 MIR935-201ENST00000401179 91 ntBASIC15.02■□□□□ -0
MEIS3P1A6NDR6 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC15.02■□□□□ -0
MEIS3P1A6NDR6 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.02■□□□□ -0
MEIS3P1A6NDR6 AC116562.2-201ENST00000507042 360 ntBASIC15.02■□□□□ -0
MEIS3P1A6NDR6 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC15.02■□□□□ -0
MEIS3P1A6NDR6 WWOX-216ENST00000569818 525 ntBASIC15.02■□□□□ -0
MEIS3P1A6NDR6 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC15.02■□□□□ -0
MEIS3P1A6NDR6 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.02■□□□□ -0
MEIS3P1A6NDR6 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.02■□□□□ -0
MEIS3P1A6NDR6 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC15.02■□□□□ -0
MEIS3P1A6NDR6 FAM197Y4-202ENST00000622692 608 ntBASIC15.02■□□□□ -0
MEIS3P1A6NDR6 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
MEIS3P1A6NDR6 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
MEIS3P1A6NDR6 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
MEIS3P1A6NDR6 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.02□□□□□ -0.01
MEIS3P1A6NDR6 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.02□□□□□ -0.01
MEIS3P1A6NDR6 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.02□□□□□ -0.01
MEIS3P1A6NDR6 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
MEIS3P1A6NDR6 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
MEIS3P1A6NDR6 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
MEIS3P1A6NDR6 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
MEIS3P1A6NDR6 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
MEIS3P1A6NDR6 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
MEIS3P1A6NDR6 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.02□□□□□ -0.01
MEIS3P1A6NDR6 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
MEIS3P1A6NDR6 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.01□□□□□ -0.01
MEIS3P1A6NDR6 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
MEIS3P1A6NDR6 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MEIS3P1A6NDR6 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
MEIS3P1A6NDR6 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.01□□□□□ -0.01
MEIS3P1A6NDR6 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.01□□□□□ -0.01
MEIS3P1A6NDR6 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MEIS3P1A6NDR6 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MEIS3P1A6NDR6 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
MEIS3P1A6NDR6 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MEIS3P1A6NDR6 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MEIS3P1A6NDR6 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MEIS3P1A6NDR6 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
MEIS3P1A6NDR6 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MEIS3P1A6NDR6 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MEIS3P1A6NDR6 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MEIS3P1A6NDR6 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.01□□□□□ -0.01
MEIS3P1A6NDR6 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.01□□□□□ -0.01
MEIS3P1A6NDR6 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MEIS3P1A6NDR6 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC15.01□□□□□ -0.01
MEIS3P1A6NDR6 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.01□□□□□ -0.01
MEIS3P1A6NDR6 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC15.01□□□□□ -0.01
MEIS3P1A6NDR6 MIR3180-4-201ENST00000582223 153 ntBASIC15.01□□□□□ -0.01
MEIS3P1A6NDR6 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.01□□□□□ -0.01
MEIS3P1A6NDR6 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.01□□□□□ -0.01
MEIS3P1A6NDR6 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.01□□□□□ -0.01
MEIS3P1A6NDR6 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MEIS3P1A6NDR6 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MEIS3P1A6NDR6 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MEIS3P1A6NDR6 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
MEIS3P1A6NDR6 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.01□□□□□ -0.01
MEIS3P1A6NDR6 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
MEIS3P1A6NDR6 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
MEIS3P1A6NDR6 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.01□□□□□ -0.01
MEIS3P1A6NDR6 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MEIS3P1A6NDR6 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.01□□□□□ -0.01
MEIS3P1A6NDR6 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MEIS3P1A6NDR6 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
MEIS3P1A6NDR6 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
MEIS3P1A6NDR6 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
MEIS3P1A6NDR6 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
MEIS3P1A6NDR6 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms