Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.37■□□□□ 0.21
TCRBV3S1A0A5B6 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
TCRBV3S1A0A5B6 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TCRBV3S1A0A5B6 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TCRBV3S1A0A5B6 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.37■□□□□ 0.21
TCRBV3S1A0A5B6 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TCRBV3S1A0A5B6 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TCRBV3S1A0A5B6 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TCRBV3S1A0A5B6 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TCRBV3S1A0A5B6 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TCRBV3S1A0A5B6 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TCRBV3S1A0A5B6 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.36■□□□□ 0.21
TCRBV3S1A0A5B6 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.36■□□□□ 0.21
TCRBV3S1A0A5B6 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TCRBV3S1A0A5B6 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.36■□□□□ 0.21
TCRBV3S1A0A5B6 AC079328.2-201ENST00000561241 3354 ntBASIC16.36■□□□□ 0.21
TCRBV3S1A0A5B6 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TCRBV3S1A0A5B6 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TCRBV3S1A0A5B6 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TCRBV3S1A0A5B6 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.36■□□□□ 0.21
TCRBV3S1A0A5B6 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TCRBV3S1A0A5B6 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.36■□□□□ 0.21
TCRBV3S1A0A5B6 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.36■□□□□ 0.21
TCRBV3S1A0A5B6 AC002558.1-201ENST00000488906 803 ntBASIC16.36■□□□□ 0.21
TCRBV3S1A0A5B6 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TCRBV3S1A0A5B6 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TCRBV3S1A0A5B6 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.36■□□□□ 0.21
TCRBV3S1A0A5B6 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.36■□□□□ 0.21
TCRBV3S1A0A5B6 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TCRBV3S1A0A5B6 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TCRBV3S1A0A5B6 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.36■□□□□ 0.21
TCRBV3S1A0A5B6 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.36■□□□□ 0.21
TCRBV3S1A0A5B6 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TCRBV3S1A0A5B6 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.36■□□□□ 0.21
TCRBV3S1A0A5B6 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TCRBV3S1A0A5B6 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.36■□□□□ 0.21
TCRBV3S1A0A5B6 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TCRBV3S1A0A5B6 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TCRBV3S1A0A5B6 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.36■□□□□ 0.21
TCRBV3S1A0A5B6 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TCRBV3S1A0A5B6 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TCRBV3S1A0A5B6 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
TCRBV3S1A0A5B6 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TCRBV3S1A0A5B6 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV3S1A0A5B6 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV3S1A0A5B6 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV3S1A0A5B6 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
TCRBV3S1A0A5B6 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.35■□□□□ 0.21
TCRBV3S1A0A5B6 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV3S1A0A5B6 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV3S1A0A5B6 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV3S1A0A5B6 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV3S1A0A5B6 AL365203.3-201ENST00000609742 2057 ntBASIC16.35■□□□□ 0.21
TCRBV3S1A0A5B6 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TCRBV3S1A0A5B6 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV3S1A0A5B6 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV3S1A0A5B6 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV3S1A0A5B6 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV3S1A0A5B6 AC007663.1-201ENST00000438948 1240 ntBASIC16.35■□□□□ 0.21
TCRBV3S1A0A5B6 CCR12P-201ENST00000446203 998 ntBASIC16.35■□□□□ 0.21
TCRBV3S1A0A5B6 AC112698.1-201ENST00000510299 916 ntBASIC16.35■□□□□ 0.21
TCRBV3S1A0A5B6 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
TCRBV3S1A0A5B6 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.35■□□□□ 0.21
TCRBV3S1A0A5B6 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.35■□□□□ 0.21
TCRBV3S1A0A5B6 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.35■□□□□ 0.21
TCRBV3S1A0A5B6 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV3S1A0A5B6 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
TCRBV3S1A0A5B6 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.35■□□□□ 0.21
TCRBV3S1A0A5B6 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.35■□□□□ 0.21
TCRBV3S1A0A5B6 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TCRBV3S1A0A5B6 AC024909.3-201ENST00000611513 2257 ntBASIC16.35■□□□□ 0.21
TCRBV3S1A0A5B6 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV3S1A0A5B6 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.35■□□□□ 0.21
TCRBV3S1A0A5B6 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.35■□□□□ 0.21
TCRBV3S1A0A5B6 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.35■□□□□ 0.21
TCRBV3S1A0A5B6 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV3S1A0A5B6 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.35■□□□□ 0.21
TCRBV3S1A0A5B6 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV3S1A0A5B6 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.35■□□□□ 0.21
TCRBV3S1A0A5B6 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV3S1A0A5B6 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.35■□□□□ 0.21
TCRBV3S1A0A5B6 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV3S1A0A5B6 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.35■□□□□ 0.21
TCRBV3S1A0A5B6 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.35■□□□□ 0.21
TCRBV3S1A0A5B6 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.35■□□□□ 0.21
TCRBV3S1A0A5B6 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms