Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC13.28□□□□□ -0.28
TRAPPC1Q9Y5R8 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAPPC1Q9Y5R8 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAPPC1Q9Y5R8 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TRAPPC1Q9Y5R8 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
TRAPPC1Q9Y5R8 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
TRAPPC1Q9Y5R8 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TRAPPC1Q9Y5R8 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TRAPPC1Q9Y5R8 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.27□□□□□ -0.28
TRAPPC1Q9Y5R8 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.28
TRAPPC1Q9Y5R8 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
TRAPPC1Q9Y5R8 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TRAPPC1Q9Y5R8 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAPPC1Q9Y5R8 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAPPC1Q9Y5R8 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TRAPPC1Q9Y5R8 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAPPC1Q9Y5R8 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.27□□□□□ -0.28
TRAPPC1Q9Y5R8 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAPPC1Q9Y5R8 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TRAPPC1Q9Y5R8 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TRAPPC1Q9Y5R8 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
TRAPPC1Q9Y5R8 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAPPC1Q9Y5R8 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAPPC1Q9Y5R8 EDA-201ENST00000338901 1233 ntBASIC13.27□□□□□ -0.29
TRAPPC1Q9Y5R8 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAPPC1Q9Y5R8 MIR939-201ENST00000401314 82 ntBASIC13.27□□□□□ -0.29
TRAPPC1Q9Y5R8 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC13.27□□□□□ -0.29
TRAPPC1Q9Y5R8 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAPPC1Q9Y5R8 AF213884.3-201ENST00000563833 479 ntBASIC13.27□□□□□ -0.29
TRAPPC1Q9Y5R8 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC13.27□□□□□ -0.29
TRAPPC1Q9Y5R8 AC005829.2-201ENST00000571422 1056 ntBASIC13.27□□□□□ -0.29
TRAPPC1Q9Y5R8 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TRAPPC1Q9Y5R8 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC13.27□□□□□ -0.29
TRAPPC1Q9Y5R8 AC005181.1-201ENST00000604782 1256 ntBASIC13.27□□□□□ -0.29
TRAPPC1Q9Y5R8 RAP2CP1-201ENST00000605103 478 ntBASIC13.27□□□□□ -0.29
TRAPPC1Q9Y5R8 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
TRAPPC1Q9Y5R8 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC13.27□□□□□ -0.29
TRAPPC1Q9Y5R8 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
TRAPPC1Q9Y5R8 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAPPC1Q9Y5R8 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.27□□□□□ -0.29
TRAPPC1Q9Y5R8 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAPPC1Q9Y5R8 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
TRAPPC1Q9Y5R8 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
TRAPPC1Q9Y5R8 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TRAPPC1Q9Y5R8 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAPPC1Q9Y5R8 UROS-202ENST00000368778 1556 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAPPC1Q9Y5R8 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
TRAPPC1Q9Y5R8 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
TRAPPC1Q9Y5R8 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAPPC1Q9Y5R8 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.27□□□□□ -0.29
TRAPPC1Q9Y5R8 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAPPC1Q9Y5R8 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAPPC1Q9Y5R8 AC100803.2-201ENST00000562459 1963 ntBASIC13.27□□□□□ -0.29
TRAPPC1Q9Y5R8 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAPPC1Q9Y5R8 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAPPC1Q9Y5R8 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
TRAPPC1Q9Y5R8 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAPPC1Q9Y5R8 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
TRAPPC1Q9Y5R8 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
TRAPPC1Q9Y5R8 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
TRAPPC1Q9Y5R8 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
TRAPPC1Q9Y5R8 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAPPC1Q9Y5R8 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAPPC1Q9Y5R8 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAPPC1Q9Y5R8 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 OR2I1P-209ENST00000641730 5365 ntBASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms