Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHB11Q9Y5F2 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB11Q9Y5F2 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB11Q9Y5F2 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDHB11Q9Y5F2 OR6D1P-202ENST00000641007 5290 ntBASIC17.17■□□□□ 0.34
PCDHB11Q9Y5F2 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB11Q9Y5F2 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHB11Q9Y5F2 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB11Q9Y5F2 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB11Q9Y5F2 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB11Q9Y5F2 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB11Q9Y5F2 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHB11Q9Y5F2 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB11Q9Y5F2 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB11Q9Y5F2 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.16■□□□□ 0.34
PCDHB11Q9Y5F2 RCN1P2-201ENST00000398357 915 ntBASIC17.16■□□□□ 0.34
PCDHB11Q9Y5F2 MIR940-201ENST00000401276 94 ntBASIC17.16■□□□□ 0.34
PCDHB11Q9Y5F2 RBM17P3-201ENST00000417687 1192 ntBASIC17.16■□□□□ 0.34
PCDHB11Q9Y5F2 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHB11Q9Y5F2 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHB11Q9Y5F2 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.16■□□□□ 0.34
PCDHB11Q9Y5F2 AC139887.3-201ENST00000568585 713 ntBASIC17.16■□□□□ 0.34
PCDHB11Q9Y5F2 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.16■□□□□ 0.34
PCDHB11Q9Y5F2 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB11Q9Y5F2 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHB11Q9Y5F2 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB11Q9Y5F2 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB11Q9Y5F2 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB11Q9Y5F2 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB11Q9Y5F2 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHB11Q9Y5F2 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB11Q9Y5F2 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB11Q9Y5F2 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHB11Q9Y5F2 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PCDHB11Q9Y5F2 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB11Q9Y5F2 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB11Q9Y5F2 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB11Q9Y5F2 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.15■□□□□ 0.34
PCDHB11Q9Y5F2 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHB11Q9Y5F2 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB11Q9Y5F2 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHB11Q9Y5F2 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.15■□□□□ 0.34
PCDHB11Q9Y5F2 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHB11Q9Y5F2 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PCDHB11Q9Y5F2 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB11Q9Y5F2 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB11Q9Y5F2 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB11Q9Y5F2 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB11Q9Y5F2 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PCDHB11Q9Y5F2 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB11Q9Y5F2 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB11Q9Y5F2 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
PCDHB11Q9Y5F2 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.15■□□□□ 0.34
PCDHB11Q9Y5F2 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB11Q9Y5F2 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHB11Q9Y5F2 RPL13AP23-201ENST00000480739 586 ntBASIC17.15■□□□□ 0.34
PCDHB11Q9Y5F2 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHB11Q9Y5F2 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.15■□□□□ 0.34
PCDHB11Q9Y5F2 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.15■□□□□ 0.34
PCDHB11Q9Y5F2 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.15■□□□□ 0.34
PCDHB11Q9Y5F2 MTDHP3-201ENST00000594186 672 ntBASIC17.15■□□□□ 0.34
PCDHB11Q9Y5F2 AL355877.3-201ENST00000622820 899 ntBASIC17.15■□□□□ 0.34
PCDHB11Q9Y5F2 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDHB11Q9Y5F2 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB11Q9Y5F2 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PCDHB11Q9Y5F2 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDHB11Q9Y5F2 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHB11Q9Y5F2 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB11Q9Y5F2 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHB11Q9Y5F2 BX276092.7-203ENST00000637198 1536 ntBASIC17.15■□□□□ 0.34
PCDHB11Q9Y5F2 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB11Q9Y5F2 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB11Q9Y5F2 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDHB11Q9Y5F2 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB11Q9Y5F2 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB11Q9Y5F2 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PCDHB11Q9Y5F2 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB11Q9Y5F2 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
PCDHB11Q9Y5F2 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
PCDHB11Q9Y5F2 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.14■□□□□ 0.34
PCDHB11Q9Y5F2 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
PCDHB11Q9Y5F2 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB11Q9Y5F2 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB11Q9Y5F2 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHB11Q9Y5F2 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHB11Q9Y5F2 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHB11Q9Y5F2 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB11Q9Y5F2 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB11Q9Y5F2 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB11Q9Y5F2 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB11Q9Y5F2 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB11Q9Y5F2 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB11Q9Y5F2 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB11Q9Y5F2 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDHB11Q9Y5F2 POLD2P1-201ENST00000511220 997 ntBASIC17.14■□□□□ 0.33
PCDHB11Q9Y5F2 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.14■□□□□ 0.33
PCDHB11Q9Y5F2 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
PCDHB11Q9Y5F2 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB11Q9Y5F2 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.14■□□□□ 0.33
PCDHB11Q9Y5F2 AC148477.8-201ENST00000624298 468 ntBASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms