Protein–RNA interactions for Protein: Q9NS71

GKN1, Gastrokine-1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GKN1Q9NS71 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GKN1Q9NS71 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.11■□□□□ 0.49
GKN1Q9NS71 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
GKN1Q9NS71 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.11■□□□□ 0.49
GKN1Q9NS71 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.11■□□□□ 0.49
GKN1Q9NS71 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.11■□□□□ 0.49
GKN1Q9NS71 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GKN1Q9NS71 MTDHP5-201ENST00000598980 586 ntBASIC18.11■□□□□ 0.49
GKN1Q9NS71 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.11■□□□□ 0.49
GKN1Q9NS71 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
GKN1Q9NS71 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
GKN1Q9NS71 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
GKN1Q9NS71 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.11■□□□□ 0.49
GKN1Q9NS71 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.11■□□□□ 0.49
GKN1Q9NS71 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GKN1Q9NS71 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
GKN1Q9NS71 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GKN1Q9NS71 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GKN1Q9NS71 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.11■□□□□ 0.49
GKN1Q9NS71 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GKN1Q9NS71 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
GKN1Q9NS71 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
GKN1Q9NS71 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
GKN1Q9NS71 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GKN1Q9NS71 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
GKN1Q9NS71 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.11■□□□□ 0.49
GKN1Q9NS71 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
GKN1Q9NS71 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
GKN1Q9NS71 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
GKN1Q9NS71 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GKN1Q9NS71 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
GKN1Q9NS71 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GKN1Q9NS71 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.1■□□□□ 0.49
GKN1Q9NS71 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.1■□□□□ 0.49
GKN1Q9NS71 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.1■□□□□ 0.49
GKN1Q9NS71 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.1■□□□□ 0.49
GKN1Q9NS71 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
GKN1Q9NS71 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GKN1Q9NS71 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GKN1Q9NS71 NCF1C-201ENST00000438382 1427 ntBASIC18.1■□□□□ 0.49
GKN1Q9NS71 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GKN1Q9NS71 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
GKN1Q9NS71 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
GKN1Q9NS71 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
GKN1Q9NS71 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.1■□□□□ 0.49
GKN1Q9NS71 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GKN1Q9NS71 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.1■□□□□ 0.49
GKN1Q9NS71 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.1■□□□□ 0.49
GKN1Q9NS71 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.1■□□□□ 0.49
GKN1Q9NS71 ELK2BP-201ENST00000415014 1224 ntBASIC18.1■□□□□ 0.49
GKN1Q9NS71 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.1■□□□□ 0.49
GKN1Q9NS71 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.1■□□□□ 0.49
GKN1Q9NS71 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GKN1Q9NS71 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.1■□□□□ 0.49
GKN1Q9NS71 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.1■□□□□ 0.49
GKN1Q9NS71 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.1■□□□□ 0.49
GKN1Q9NS71 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.1■□□□□ 0.49
GKN1Q9NS71 AP001160.2-201ENST00000596071 487 ntBASIC18.1■□□□□ 0.49
GKN1Q9NS71 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
GKN1Q9NS71 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
GKN1Q9NS71 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
GKN1Q9NS71 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.1■□□□□ 0.49
GKN1Q9NS71 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.1■□□□□ 0.49
GKN1Q9NS71 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GKN1Q9NS71 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GKN1Q9NS71 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
GKN1Q9NS71 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GKN1Q9NS71 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GKN1Q9NS71 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GKN1Q9NS71 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GKN1Q9NS71 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GKN1Q9NS71 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GKN1Q9NS71 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GKN1Q9NS71 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GKN1Q9NS71 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GKN1Q9NS71 AC006116.8-202ENST00000587620 1550 ntBASIC18.09■□□□□ 0.49
GKN1Q9NS71 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
GKN1Q9NS71 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.09■□□□□ 0.49
GKN1Q9NS71 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GKN1Q9NS71 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GKN1Q9NS71 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GKN1Q9NS71 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GKN1Q9NS71 MYCLP1-201ENST00000372451 1075 ntBASIC18.09■□□□□ 0.49
GKN1Q9NS71 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GKN1Q9NS71 CRYGEP-201ENST00000412192 528 ntBASIC18.09■□□□□ 0.49
GKN1Q9NS71 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.09■□□□□ 0.49
GKN1Q9NS71 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
GKN1Q9NS71 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.09■□□□□ 0.49
GKN1Q9NS71 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.09■□□□□ 0.49
GKN1Q9NS71 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.09■□□□□ 0.49
GKN1Q9NS71 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.09■□□□□ 0.49
GKN1Q9NS71 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.09■□□□□ 0.49
GKN1Q9NS71 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.09■□□□□ 0.49
GKN1Q9NS71 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.09■□□□□ 0.49
GKN1Q9NS71 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GKN1Q9NS71 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.09■□□□□ 0.49
GKN1Q9NS71 HTR7P1-202ENST00000624664 4411 ntBASIC18.09■□□□□ 0.49
GKN1Q9NS71 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GKN1Q9NS71 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
GKN1Q9NS71 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms