Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM2Q9C040 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM2Q9C040 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM2Q9C040 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIM2Q9C040 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
TRIM2Q9C040 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TRIM2Q9C040 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM2Q9C040 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM2Q9C040 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM2Q9C040 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM2Q9C040 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM2Q9C040 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
TRIM2Q9C040 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM2Q9C040 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM2Q9C040 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM2Q9C040 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM2Q9C040 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
TRIM2Q9C040 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.12■□□□□ 0.17
TRIM2Q9C040 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM2Q9C040 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TRIM2Q9C040 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM2Q9C040 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.12■□□□□ 0.17
TRIM2Q9C040 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TRIM2Q9C040 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM2Q9C040 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM2Q9C040 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
TRIM2Q9C040 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM2Q9C040 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM2Q9C040 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM2Q9C040 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TRIM2Q9C040 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TRIM2Q9C040 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM2Q9C040 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM2Q9C040 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM2Q9C040 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM2Q9C040 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM2Q9C040 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM2Q9C040 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.12■□□□□ 0.17
TRIM2Q9C040 AC090616.6-201ENST00000582640 721 ntBASIC16.12■□□□□ 0.17
TRIM2Q9C040 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.12■□□□□ 0.17
TRIM2Q9C040 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.12■□□□□ 0.17
TRIM2Q9C040 AC069148.1-201ENST00000608741 768 ntBASIC16.12■□□□□ 0.17
TRIM2Q9C040 AC093458.2-201ENST00000623150 629 ntBASIC16.12■□□□□ 0.17
TRIM2Q9C040 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM2Q9C040 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM2Q9C040 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TRIM2Q9C040 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.12■□□□□ 0.17
TRIM2Q9C040 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM2Q9C040 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM2Q9C040 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM2Q9C040 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.12■□□□□ 0.17
TRIM2Q9C040 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM2Q9C040 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM2Q9C040 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.12■□□□□ 0.17
TRIM2Q9C040 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM2Q9C040 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.12■□□□□ 0.17
TRIM2Q9C040 PRORSD1P-202ENST00000563365 2154 ntBASIC16.11■□□□□ 0.17
TRIM2Q9C040 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM2Q9C040 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM2Q9C040 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM2Q9C040 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM2Q9C040 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM2Q9C040 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM2Q9C040 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM2Q9C040 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM2Q9C040 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM2Q9C040 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM2Q9C040 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM2Q9C040 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
TRIM2Q9C040 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TRIM2Q9C040 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM2Q9C040 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TRIM2Q9C040 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM2Q9C040 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM2Q9C040 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM2Q9C040 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM2Q9C040 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM2Q9C040 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM2Q9C040 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM2Q9C040 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TRIM2Q9C040 KRT18P56-201ENST00000507275 550 ntBASIC16.11■□□□□ 0.17
TRIM2Q9C040 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.11■□□□□ 0.17
TRIM2Q9C040 AC011498.5-201ENST00000592027 486 ntBASIC16.11■□□□□ 0.17
TRIM2Q9C040 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.11■□□□□ 0.17
TRIM2Q9C040 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.11■□□□□ 0.17
TRIM2Q9C040 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.11■□□□□ 0.17
TRIM2Q9C040 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM2Q9C040 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM2Q9C040 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM2Q9C040 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TRIM2Q9C040 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM2Q9C040 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRIM2Q9C040 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM2Q9C040 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM2Q9C040 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM2Q9C040 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM2Q9C040 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRIM2Q9C040 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM2Q9C040 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM2Q9C040 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms