Protein–RNA interactions for Protein: Q9BV40

VAMP8, Vesicle-associated membrane protein 8, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP8Q9BV40 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP8Q9BV40 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
VAMP8Q9BV40 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP8Q9BV40 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP8Q9BV40 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP8Q9BV40 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
VAMP8Q9BV40 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP8Q9BV40 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP8Q9BV40 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
VAMP8Q9BV40 LINC00304-203ENST00000565008 1864 ntBASIC12.79□□□□□ -0.36
VAMP8Q9BV40 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
VAMP8Q9BV40 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP8Q9BV40 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP8Q9BV40 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP8Q9BV40 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP8Q9BV40 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC12.79□□□□□ -0.36
VAMP8Q9BV40 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC12.79□□□□□ -0.36
VAMP8Q9BV40 CALM3-202ENST00000391918 702 ntTSL 2 BASIC12.79□□□□□ -0.36
VAMP8Q9BV40 SERP1-208ENST00000491660 830 ntTSL 2 BASIC12.79□□□□□ -0.36
VAMP8Q9BV40 AL138724.1-201ENST00000606771 1088 ntBASIC12.79□□□□□ -0.36
VAMP8Q9BV40 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP8Q9BV40 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP8Q9BV40 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP8Q9BV40 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP8Q9BV40 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC12.79□□□□□ -0.36
VAMP8Q9BV40 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP8Q9BV40 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC12.79□□□□□ -0.36
VAMP8Q9BV40 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP8Q9BV40 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP8Q9BV40 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP8Q9BV40 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP8Q9BV40 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP8Q9BV40 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP8Q9BV40 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP8Q9BV40 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.79□□□□□ -0.36
VAMP8Q9BV40 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC12.79□□□□□ -0.36
VAMP8Q9BV40 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VAMP8Q9BV40 AL357033.4-201ENST00000617703 1807 ntBASIC12.78□□□□□ -0.36
VAMP8Q9BV40 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VAMP8Q9BV40 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VAMP8Q9BV40 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VAMP8Q9BV40 AL137784.3-201ENST00000623858 2288 ntBASIC12.78□□□□□ -0.36
VAMP8Q9BV40 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
VAMP8Q9BV40 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VAMP8Q9BV40 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC12.78□□□□□ -0.36
VAMP8Q9BV40 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VAMP8Q9BV40 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
VAMP8Q9BV40 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VAMP8Q9BV40 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC12.78□□□□□ -0.36
VAMP8Q9BV40 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VAMP8Q9BV40 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VAMP8Q9BV40 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VAMP8Q9BV40 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VAMP8Q9BV40 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VAMP8Q9BV40 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
VAMP8Q9BV40 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VAMP8Q9BV40 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VAMP8Q9BV40 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VAMP8Q9BV40 MFF-208ENST00000409616 1247 ntTSL 5 BASIC12.78□□□□□ -0.36
VAMP8Q9BV40 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC12.78□□□□□ -0.36
VAMP8Q9BV40 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VAMP8Q9BV40 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC12.78□□□□□ -0.36
VAMP8Q9BV40 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC12.78□□□□□ -0.36
VAMP8Q9BV40 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC12.78□□□□□ -0.36
VAMP8Q9BV40 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC12.78□□□□□ -0.36
VAMP8Q9BV40 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
VAMP8Q9BV40 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VAMP8Q9BV40 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC12.78□□□□□ -0.36
VAMP8Q9BV40 AC067750.1-201ENST00000608826 6545 ntBASIC12.78□□□□□ -0.36
VAMP8Q9BV40 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC12.78□□□□□ -0.36
VAMP8Q9BV40 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
VAMP8Q9BV40 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
VAMP8Q9BV40 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
VAMP8Q9BV40 KRT8P8-201ENST00000434750 1448 ntBASIC12.78□□□□□ -0.36
VAMP8Q9BV40 RBM17P2-201ENST00000616397 1405 ntBASIC12.78□□□□□ -0.36
VAMP8Q9BV40 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VAMP8Q9BV40 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VAMP8Q9BV40 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC12.78□□□□□ -0.36
VAMP8Q9BV40 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC12.78□□□□□ -0.36
VAMP8Q9BV40 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VAMP8Q9BV40 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC12.77□□□□□ -0.36
VAMP8Q9BV40 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
VAMP8Q9BV40 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
VAMP8Q9BV40 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
VAMP8Q9BV40 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
VAMP8Q9BV40 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
VAMP8Q9BV40 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC12.77□□□□□ -0.36
VAMP8Q9BV40 AC116353.5-201ENST00000638148 1699 ntBASIC12.77□□□□□ -0.36
VAMP8Q9BV40 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC12.77□□□□□ -0.36
VAMP8Q9BV40 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
VAMP8Q9BV40 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
VAMP8Q9BV40 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
VAMP8Q9BV40 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
VAMP8Q9BV40 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
VAMP8Q9BV40 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
VAMP8Q9BV40 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
VAMP8Q9BV40 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC12.77□□□□□ -0.37
VAMP8Q9BV40 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.77□□□□□ -0.37
VAMP8Q9BV40 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VAMP8Q9BV40 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms