Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PHOX2BQ99453 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PHOX2BQ99453 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PHOX2BQ99453 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PHOX2BQ99453 FO538757.1-201ENST00000623083 1397 ntBASIC17.66■□□□□ 0.42
PHOX2BQ99453 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHOX2BQ99453 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHOX2BQ99453 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHOX2BQ99453 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.65■□□□□ 0.42
PHOX2BQ99453 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.65■□□□□ 0.42
PHOX2BQ99453 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHOX2BQ99453 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
PHOX2BQ99453 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.65■□□□□ 0.42
PHOX2BQ99453 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.65■□□□□ 0.42
PHOX2BQ99453 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PHOX2BQ99453 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.65■□□□□ 0.42
PHOX2BQ99453 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
PHOX2BQ99453 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHOX2BQ99453 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHOX2BQ99453 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.65■□□□□ 0.42
PHOX2BQ99453 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHOX2BQ99453 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
PHOX2BQ99453 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.65■□□□□ 0.42
PHOX2BQ99453 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.65■□□□□ 0.42
PHOX2BQ99453 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.65■□□□□ 0.42
PHOX2BQ99453 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC17.65■□□□□ 0.42
PHOX2BQ99453 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.65■□□□□ 0.42
PHOX2BQ99453 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.65■□□□□ 0.42
PHOX2BQ99453 CNN2P2-201ENST00000443536 909 ntBASIC17.65■□□□□ 0.42
PHOX2BQ99453 CNN2P3-201ENST00000450201 906 ntBASIC17.65■□□□□ 0.42
PHOX2BQ99453 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PHOX2BQ99453 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.65■□□□□ 0.42
PHOX2BQ99453 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.65■□□□□ 0.42
PHOX2BQ99453 AL132655.2-201ENST00000596276 594 ntBASIC17.65■□□□□ 0.42
PHOX2BQ99453 AL136317.3-201ENST00000618497 906 ntBASIC17.65■□□□□ 0.42
PHOX2BQ99453 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.65■□□□□ 0.42
PHOX2BQ99453 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHOX2BQ99453 AL163051.1-201ENST00000569214 1512 ntBASIC17.65■□□□□ 0.42
PHOX2BQ99453 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHOX2BQ99453 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHOX2BQ99453 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHOX2BQ99453 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHOX2BQ99453 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHOX2BQ99453 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.65■□□□□ 0.42
PHOX2BQ99453 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHOX2BQ99453 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
PHOX2BQ99453 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PHOX2BQ99453 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHOX2BQ99453 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PHOX2BQ99453 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.65■□□□□ 0.42
PHOX2BQ99453 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHOX2BQ99453 AL161938.1-201ENST00000569833 2180 ntBASIC17.64■□□□□ 0.42
PHOX2BQ99453 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.64■□□□□ 0.42
PHOX2BQ99453 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
PHOX2BQ99453 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHOX2BQ99453 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PHOX2BQ99453 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHOX2BQ99453 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHOX2BQ99453 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.64■□□□□ 0.41
PHOX2BQ99453 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PHOX2BQ99453 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHOX2BQ99453 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PHOX2BQ99453 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
PHOX2BQ99453 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
PHOX2BQ99453 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.64■□□□□ 0.41
PHOX2BQ99453 RHOQP3-201ENST00000437982 621 ntBASIC17.64■□□□□ 0.41
PHOX2BQ99453 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.64■□□□□ 0.41
PHOX2BQ99453 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.64■□□□□ 0.41
PHOX2BQ99453 PARP8-206ENST00000503665 572 ntTSL 4 BASIC17.64■□□□□ 0.41
PHOX2BQ99453 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.64■□□□□ 0.41
PHOX2BQ99453 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
PHOX2BQ99453 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC17.64■□□□□ 0.41
PHOX2BQ99453 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.64■□□□□ 0.41
PHOX2BQ99453 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.64■□□□□ 0.41
PHOX2BQ99453 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.64■□□□□ 0.41
PHOX2BQ99453 SPDYE22P-201ENST00000582158 798 ntBASIC17.64■□□□□ 0.41
PHOX2BQ99453 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.64■□□□□ 0.41
PHOX2BQ99453 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.64■□□□□ 0.41
PHOX2BQ99453 TUBB3P1-201ENST00000405796 1332 ntBASIC17.64■□□□□ 0.41
PHOX2BQ99453 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHOX2BQ99453 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHOX2BQ99453 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHOX2BQ99453 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.64■□□□□ 0.41
PHOX2BQ99453 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PHOX2BQ99453 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHOX2BQ99453 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHOX2BQ99453 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
PHOX2BQ99453 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHOX2BQ99453 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHOX2BQ99453 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PHOX2BQ99453 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHOX2BQ99453 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
PHOX2BQ99453 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHOX2BQ99453 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PHOX2BQ99453 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHOX2BQ99453 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHOX2BQ99453 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.63■□□□□ 0.41
PHOX2BQ99453 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHOX2BQ99453 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHOX2BQ99453 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms