Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHAMP1Q96JM3 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHAMP1Q96JM3 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHAMP1Q96JM3 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.31■□□□□ 0.84
CHAMP1Q96JM3 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHAMP1Q96JM3 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHAMP1Q96JM3 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHAMP1Q96JM3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CHAMP1Q96JM3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHAMP1Q96JM3 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.3■□□□□ 0.84
CHAMP1Q96JM3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHAMP1Q96JM3 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHAMP1Q96JM3 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHAMP1Q96JM3 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHAMP1Q96JM3 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CHAMP1Q96JM3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHAMP1Q96JM3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.3■□□□□ 0.84
CHAMP1Q96JM3 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
CHAMP1Q96JM3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.3■□□□□ 0.84
CHAMP1Q96JM3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.3■□□□□ 0.84
CHAMP1Q96JM3 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.3■□□□□ 0.84
CHAMP1Q96JM3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.3■□□□□ 0.84
CHAMP1Q96JM3 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHAMP1Q96JM3 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CHAMP1Q96JM3 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHAMP1Q96JM3 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHAMP1Q96JM3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHAMP1Q96JM3 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHAMP1Q96JM3 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHAMP1Q96JM3 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHAMP1Q96JM3 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHAMP1Q96JM3 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC20.3■□□□□ 0.84
CHAMP1Q96JM3 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
CHAMP1Q96JM3 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
CHAMP1Q96JM3 AC010460.3-201ENST00000511359 1579 ntBASIC20.29■□□□□ 0.84
CHAMP1Q96JM3 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHAMP1Q96JM3 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHAMP1Q96JM3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHAMP1Q96JM3 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHAMP1Q96JM3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHAMP1Q96JM3 AC090340.1-201ENST00000620778 4980 ntBASIC20.29■□□□□ 0.84
CHAMP1Q96JM3 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHAMP1Q96JM3 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHAMP1Q96JM3 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC20.29■□□□□ 0.84
CHAMP1Q96JM3 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHAMP1Q96JM3 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHAMP1Q96JM3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.29■□□□□ 0.84
CHAMP1Q96JM3 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.29■□□□□ 0.84
CHAMP1Q96JM3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHAMP1Q96JM3 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CHAMP1Q96JM3 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.29■□□□□ 0.84
CHAMP1Q96JM3 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.29■□□□□ 0.84
CHAMP1Q96JM3 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.29■□□□□ 0.84
CHAMP1Q96JM3 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.29■□□□□ 0.84
CHAMP1Q96JM3 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.29■□□□□ 0.84
CHAMP1Q96JM3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHAMP1Q96JM3 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHAMP1Q96JM3 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHAMP1Q96JM3 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHAMP1Q96JM3 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHAMP1Q96JM3 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHAMP1Q96JM3 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHAMP1Q96JM3 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
CHAMP1Q96JM3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHAMP1Q96JM3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHAMP1Q96JM3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHAMP1Q96JM3 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHAMP1Q96JM3 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHAMP1Q96JM3 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHAMP1Q96JM3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC20.29■□□□□ 0.84
CHAMP1Q96JM3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHAMP1Q96JM3 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHAMP1Q96JM3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHAMP1Q96JM3 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC20.28■□□□□ 0.84
CHAMP1Q96JM3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.28■□□□□ 0.84
CHAMP1Q96JM3 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHAMP1Q96JM3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHAMP1Q96JM3 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHAMP1Q96JM3 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.28■□□□□ 0.84
CHAMP1Q96JM3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
CHAMP1Q96JM3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHAMP1Q96JM3 HLA-F-220ENST00000434407 884 ntBASIC20.28■□□□□ 0.84
CHAMP1Q96JM3 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.28■□□□□ 0.84
CHAMP1Q96JM3 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.28■□□□□ 0.84
CHAMP1Q96JM3 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.28■□□□□ 0.84
CHAMP1Q96JM3 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.28■□□□□ 0.84
CHAMP1Q96JM3 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.28■□□□□ 0.84
CHAMP1Q96JM3 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CHAMP1Q96JM3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
CHAMP1Q96JM3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC20.28■□□□□ 0.84
CHAMP1Q96JM3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHAMP1Q96JM3 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHAMP1Q96JM3 OS9-205ENST00000413095 1660 ntTSL 2 BASIC20.28■□□□□ 0.84
CHAMP1Q96JM3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHAMP1Q96JM3 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CHAMP1Q96JM3 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC20.28■□□□□ 0.84
CHAMP1Q96JM3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC20.28■□□□□ 0.84
CHAMP1Q96JM3 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHAMP1Q96JM3 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHAMP1Q96JM3 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms