Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP6Q96FZ7 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.66■□□□□ 0.42
CHMP6Q96FZ7 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CHMP6Q96FZ7 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.66■□□□□ 0.42
CHMP6Q96FZ7 AC009949.1-201ENST00000623048 1830 ntBASIC17.66■□□□□ 0.42
CHMP6Q96FZ7 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.66■□□□□ 0.42
CHMP6Q96FZ7 RNF216P1-203ENST00000404404 2427 ntBASIC17.66■□□□□ 0.42
CHMP6Q96FZ7 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.66■□□□□ 0.42
CHMP6Q96FZ7 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.66■□□□□ 0.42
CHMP6Q96FZ7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP6Q96FZ7 AC098590.1-201ENST00000468126 897 ntBASIC17.66■□□□□ 0.42
CHMP6Q96FZ7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.66■□□□□ 0.42
CHMP6Q96FZ7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.66■□□□□ 0.42
CHMP6Q96FZ7 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CHMP6Q96FZ7 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP6Q96FZ7 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP6Q96FZ7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.66■□□□□ 0.42
CHMP6Q96FZ7 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP6Q96FZ7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.66■□□□□ 0.42
CHMP6Q96FZ7 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP6Q96FZ7 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CHMP6Q96FZ7 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CHMP6Q96FZ7 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CHMP6Q96FZ7 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP6Q96FZ7 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP6Q96FZ7 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
CHMP6Q96FZ7 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP6Q96FZ7 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
CHMP6Q96FZ7 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP6Q96FZ7 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP6Q96FZ7 AC092171.3-201ENST00000610122 2651 ntBASIC17.65■□□□□ 0.42
CHMP6Q96FZ7 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP6Q96FZ7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP6Q96FZ7 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP6Q96FZ7 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP6Q96FZ7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.65■□□□□ 0.42
CHMP6Q96FZ7 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.65■□□□□ 0.42
CHMP6Q96FZ7 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP6Q96FZ7 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
CHMP6Q96FZ7 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP6Q96FZ7 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP6Q96FZ7 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP6Q96FZ7 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP6Q96FZ7 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP6Q96FZ7 FAM207BP-201ENST00000447172 505 ntBASIC17.65■□□□□ 0.42
CHMP6Q96FZ7 UBE2SP1-201ENST00000450587 669 ntBASIC17.65■□□□□ 0.42
CHMP6Q96FZ7 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.65■□□□□ 0.42
CHMP6Q96FZ7 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.65■□□□□ 0.42
CHMP6Q96FZ7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.65■□□□□ 0.42
CHMP6Q96FZ7 MIR3180-5-201ENST00000583743 153 ntBASIC17.65■□□□□ 0.42
CHMP6Q96FZ7 CD177P1-201ENST00000606252 935 ntBASIC17.65■□□□□ 0.42
CHMP6Q96FZ7 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP6Q96FZ7 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CHMP6Q96FZ7 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.65■□□□□ 0.42
CHMP6Q96FZ7 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP6Q96FZ7 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP6Q96FZ7 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP6Q96FZ7 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP6Q96FZ7 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP6Q96FZ7 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP6Q96FZ7 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP6Q96FZ7 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP6Q96FZ7 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP6Q96FZ7 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CHMP6Q96FZ7 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
CHMP6Q96FZ7 AC078925.2-201ENST00000624013 1973 ntBASIC17.64■□□□□ 0.41
CHMP6Q96FZ7 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP6Q96FZ7 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.64■□□□□ 0.41
CHMP6Q96FZ7 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CHMP6Q96FZ7 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.64■□□□□ 0.41
CHMP6Q96FZ7 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP6Q96FZ7 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP6Q96FZ7 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.64■□□□□ 0.41
CHMP6Q96FZ7 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP6Q96FZ7 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP6Q96FZ7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP6Q96FZ7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.64■□□□□ 0.41
CHMP6Q96FZ7 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.64■□□□□ 0.41
CHMP6Q96FZ7 GCSHP5-201ENST00000443090 522 ntBASIC17.64■□□□□ 0.41
CHMP6Q96FZ7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.64■□□□□ 0.41
CHMP6Q96FZ7 MIR6786-201ENST00000616843 113 ntBASIC17.64■□□□□ 0.41
CHMP6Q96FZ7 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.64■□□□□ 0.41
CHMP6Q96FZ7 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP6Q96FZ7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.64■□□□□ 0.41
CHMP6Q96FZ7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.64■□□□□ 0.41
CHMP6Q96FZ7 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.64■□□□□ 0.41
CHMP6Q96FZ7 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP6Q96FZ7 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP6Q96FZ7 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP6Q96FZ7 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
CHMP6Q96FZ7 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP6Q96FZ7 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.64■□□□□ 0.41
CHMP6Q96FZ7 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP6Q96FZ7 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.64■□□□□ 0.41
CHMP6Q96FZ7 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
CHMP6Q96FZ7 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
CHMP6Q96FZ7 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP6Q96FZ7 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP6Q96FZ7 HOXB1-202ENST00000577092 1414 ntBASIC17.64■□□□□ 0.41
CHMP6Q96FZ7 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms